Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb3Q91XZ7 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb3Q91XZ7 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb3Q91XZ7 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb3Q91XZ7 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb3Q91XZ7 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb3Q91XZ7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb3Q91XZ7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb3Q91XZ7 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb3Q91XZ7 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Pcdhb3Q91XZ7 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb3Q91XZ7 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb3Q91XZ7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb3Q91XZ7 Gm9103-201ENSMUST00000119371 405 ntBASIC15.33■□□□□ 0.04
Pcdhb3Q91XZ7 Gm44044-201ENSMUST00000205178 1089 ntBASIC15.33■□□□□ 0.04
Pcdhb3Q91XZ7 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Pcdhb3Q91XZ7 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdhb3Q91XZ7 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb3Q91XZ7 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb3Q91XZ7 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdhb3Q91XZ7 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb3Q91XZ7 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.33■□□□□ 0.04
Pcdhb3Q91XZ7 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb3Q91XZ7 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Pcdhb3Q91XZ7 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb3Q91XZ7 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb3Q91XZ7 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb3Q91XZ7 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb3Q91XZ7 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.33■□□□□ 0.04
Pcdhb3Q91XZ7 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb3Q91XZ7 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb3Q91XZ7 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Pcdhb3Q91XZ7 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdhb3Q91XZ7 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb3Q91XZ7 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.33■□□□□ 0.04
Pcdhb3Q91XZ7 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhb3Q91XZ7 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb3Q91XZ7 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdhb3Q91XZ7 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb3Q91XZ7 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb3Q91XZ7 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdhb3Q91XZ7 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb3Q91XZ7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb3Q91XZ7 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb3Q91XZ7 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb3Q91XZ7 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb3Q91XZ7 Gm11336-201ENSMUST00000118168 334 ntBASIC15.32■□□□□ 0.04
Pcdhb3Q91XZ7 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.32■□□□□ 0.04
Pcdhb3Q91XZ7 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdhb3Q91XZ7 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.32■□□□□ 0.04
Pcdhb3Q91XZ7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhb3Q91XZ7 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.32■□□□□ 0.04
Pcdhb3Q91XZ7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Pcdhb3Q91XZ7 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb3Q91XZ7 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.32■□□□□ 0.04
Pcdhb3Q91XZ7 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb3Q91XZ7 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb3Q91XZ7 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb3Q91XZ7 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb3Q91XZ7 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb3Q91XZ7 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.32■□□□□ 0.04
Pcdhb3Q91XZ7 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb3Q91XZ7 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb3Q91XZ7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms