Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATL1Q8WXF7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.77■□□□□ 0.44
ATL1Q8WXF7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATL1Q8WXF7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
ATL1Q8WXF7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
ATL1Q8WXF7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.77■□□□□ 0.44
ATL1Q8WXF7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
ATL1Q8WXF7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATL1Q8WXF7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
ATL1Q8WXF7 PVRIG2P-201ENST00000435460 978 ntBASIC17.77■□□□□ 0.44
ATL1Q8WXF7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.77■□□□□ 0.44
ATL1Q8WXF7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.77■□□□□ 0.44
ATL1Q8WXF7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.77■□□□□ 0.44
ATL1Q8WXF7 GCSHP2-201ENST00000560971 527 ntBASIC17.77■□□□□ 0.44
ATL1Q8WXF7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.77■□□□□ 0.44
ATL1Q8WXF7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
ATL1Q8WXF7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATL1Q8WXF7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
ATL1Q8WXF7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATL1Q8WXF7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATL1Q8WXF7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.77■□□□□ 0.43
ATL1Q8WXF7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
ATL1Q8WXF7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
ATL1Q8WXF7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATL1Q8WXF7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATL1Q8WXF7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATL1Q8WXF7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATL1Q8WXF7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATL1Q8WXF7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATL1Q8WXF7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATL1Q8WXF7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
ATL1Q8WXF7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
ATL1Q8WXF7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.76■□□□□ 0.43
ATL1Q8WXF7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.76■□□□□ 0.43
ATL1Q8WXF7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATL1Q8WXF7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.76■□□□□ 0.43
ATL1Q8WXF7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATL1Q8WXF7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.76■□□□□ 0.43
ATL1Q8WXF7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.76■□□□□ 0.43
ATL1Q8WXF7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATL1Q8WXF7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
ATL1Q8WXF7 AL023973.1-201ENST00000624619 620 ntBASIC17.76■□□□□ 0.43
ATL1Q8WXF7 AL157888.1-201ENST00000631930 593 ntBASIC17.76■□□□□ 0.43
ATL1Q8WXF7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
ATL1Q8WXF7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.76■□□□□ 0.43
ATL1Q8WXF7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATL1Q8WXF7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
ATL1Q8WXF7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATL1Q8WXF7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATL1Q8WXF7 PHGDH-209ENST00000641074 1780 ntBASIC17.76■□□□□ 0.43
ATL1Q8WXF7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.76■□□□□ 0.43
ATL1Q8WXF7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATL1Q8WXF7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 AL024508.2-201ENST00000607749 1894 ntBASIC17.75■□□□□ 0.43
ATL1Q8WXF7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ATL1Q8WXF7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATL1Q8WXF7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.74■□□□□ 0.43
ATL1Q8WXF7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.74■□□□□ 0.43
ATL1Q8WXF7 PCDHB18P-201ENST00000524813 2368 ntBASIC17.74■□□□□ 0.43
ATL1Q8WXF7 AC073508.3-201ENST00000619697 1419 ntBASIC17.74■□□□□ 0.43
ATL1Q8WXF7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATL1Q8WXF7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATL1Q8WXF7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.74■□□□□ 0.43
ATL1Q8WXF7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.74■□□□□ 0.43
ATL1Q8WXF7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATL1Q8WXF7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms