Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Gm9013-201ENSMUST00000132939 882 ntBASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Gm23547-201ENSMUST00000158210 271 ntBASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ppp1r3eQ8BRJ4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ppp1r3eQ8BRJ4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ppp1r3eQ8BRJ4 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ppp1r3eQ8BRJ4 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ppp1r3eQ8BRJ4 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ppp1r3eQ8BRJ4 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ppp1r3eQ8BRJ4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ppp1r3eQ8BRJ4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ppp1r3eQ8BRJ4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Ppp1r3eQ8BRJ4 Gm15794-201ENSMUST00000120182 631 ntBASIC14.31□□□□□ -0.12
Ppp1r3eQ8BRJ4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ppp1r3eQ8BRJ4 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ppp1r3eQ8BRJ4 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.31□□□□□ -0.12
Ppp1r3eQ8BRJ4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.31□□□□□ -0.12
Ppp1r3eQ8BRJ4 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ppp1r3eQ8BRJ4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ppp1r3eQ8BRJ4 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ppp1r3eQ8BRJ4 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ppp1r3eQ8BRJ4 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ppp1r3eQ8BRJ4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ppp1r3eQ8BRJ4 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ppp1r3eQ8BRJ4 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ppp1r3eQ8BRJ4 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ppp1r3eQ8BRJ4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ppp1r3eQ8BRJ4 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ppp1r3eQ8BRJ4 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ppp1r3eQ8BRJ4 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ppp1r3eQ8BRJ4 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ppp1r3eQ8BRJ4 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ppp1r3eQ8BRJ4 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ppp1r3eQ8BRJ4 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ppp1r3eQ8BRJ4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ppp1r3eQ8BRJ4 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ppp1r3eQ8BRJ4 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ppp1r3eQ8BRJ4 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ppp1r3eQ8BRJ4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Ppp1r3eQ8BRJ4 Gm7153-201ENSMUST00000117092 455 ntBASIC14.3□□□□□ -0.12
Ppp1r3eQ8BRJ4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ppp1r3eQ8BRJ4 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.3□□□□□ -0.12
Ppp1r3eQ8BRJ4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ppp1r3eQ8BRJ4 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ppp1r3eQ8BRJ4 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ppp1r3eQ8BRJ4 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ppp1r3eQ8BRJ4 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ppp1r3eQ8BRJ4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ppp1r3eQ8BRJ4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ppp1r3eQ8BRJ4 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Ppp1r3eQ8BRJ4 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ppp1r3eQ8BRJ4 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ppp1r3eQ8BRJ4 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ppp1r3eQ8BRJ4 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.29□□□□□ -0.12
Ppp1r3eQ8BRJ4 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ppp1r3eQ8BRJ4 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ppp1r3eQ8BRJ4 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ppp1r3eQ8BRJ4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ppp1r3eQ8BRJ4 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ppp1r3eQ8BRJ4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ppp1r3eQ8BRJ4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ppp1r3eQ8BRJ4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.29□□□□□ -0.12
Ppp1r3eQ8BRJ4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ppp1r3eQ8BRJ4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms