Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Depdc1bQ8BH88 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Depdc1bQ8BH88 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Depdc1bQ8BH88 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.63■□□□□ 0.25
Depdc1bQ8BH88 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.63■□□□□ 0.25
Depdc1bQ8BH88 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Depdc1bQ8BH88 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Depdc1bQ8BH88 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Depdc1bQ8BH88 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Depdc1bQ8BH88 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.63■□□□□ 0.25
Depdc1bQ8BH88 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Depdc1bQ8BH88 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Gm13418-201ENSMUST00000119097 944 ntBASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Gm7230-201ENSMUST00000173026 815 ntBASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Mir5126-201ENSMUST00000175513 77 ntBASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Gm27525-201ENSMUST00000184465 107 ntBASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Depdc1bQ8BH88 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Depdc1bQ8BH88 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Depdc1bQ8BH88 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Depdc1bQ8BH88 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Depdc1bQ8BH88 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.61■□□□□ 0.25
Depdc1bQ8BH88 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Depdc1bQ8BH88 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.61■□□□□ 0.25
Depdc1bQ8BH88 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.61■□□□□ 0.25
Depdc1bQ8BH88 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Depdc1bQ8BH88 Gm18622-201ENSMUST00000219361 595 ntBASIC16.61■□□□□ 0.25
Depdc1bQ8BH88 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Depdc1bQ8BH88 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Depdc1bQ8BH88 Gm5867-201ENSMUST00000063197 592 ntBASIC16.61■□□□□ 0.25
Depdc1bQ8BH88 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Depdc1bQ8BH88 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Depdc1bQ8BH88 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Depdc1bQ8BH88 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Depdc1bQ8BH88 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Depdc1bQ8BH88 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 Gm19164-201ENSMUST00000210667 640 ntBASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Depdc1bQ8BH88 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms