Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3tc2Q80VA5 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3tc2Q80VA5 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Sh3tc2Q80VA5 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3tc2Q80VA5 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3tc2Q80VA5 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3tc2Q80VA5 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Sh3tc2Q80VA5 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3tc2Q80VA5 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3tc2Q80VA5 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3tc2Q80VA5 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.63■□□□□ 0.25
Sh3tc2Q80VA5 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.63■□□□□ 0.25
Sh3tc2Q80VA5 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.63■□□□□ 0.25
Sh3tc2Q80VA5 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3tc2Q80VA5 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3tc2Q80VA5 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.63■□□□□ 0.25
Sh3tc2Q80VA5 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3tc2Q80VA5 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Sh3tc2Q80VA5 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.63■□□□□ 0.25
Sh3tc2Q80VA5 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3tc2Q80VA5 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3tc2Q80VA5 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3tc2Q80VA5 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sh3tc2Q80VA5 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3tc2Q80VA5 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3tc2Q80VA5 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Sh3tc2Q80VA5 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Sh3tc2Q80VA5 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.62■□□□□ 0.25
Sh3tc2Q80VA5 Gm18889-201ENSMUST00000174284 929 ntBASIC16.62■□□□□ 0.25
Sh3tc2Q80VA5 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.62■□□□□ 0.25
Sh3tc2Q80VA5 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Sh3tc2Q80VA5 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.62■□□□□ 0.25
Sh3tc2Q80VA5 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.62■□□□□ 0.25
Sh3tc2Q80VA5 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.62■□□□□ 0.25
Sh3tc2Q80VA5 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.62■□□□□ 0.25
Sh3tc2Q80VA5 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3tc2Q80VA5 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.62■□□□□ 0.25
Sh3tc2Q80VA5 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.62■□□□□ 0.25
Sh3tc2Q80VA5 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3tc2Q80VA5 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Sh3tc2Q80VA5 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3tc2Q80VA5 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3tc2Q80VA5 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sh3tc2Q80VA5 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3tc2Q80VA5 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3tc2Q80VA5 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3tc2Q80VA5 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.61■□□□□ 0.25
Sh3tc2Q80VA5 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.61■□□□□ 0.25
Sh3tc2Q80VA5 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3tc2Q80VA5 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3tc2Q80VA5 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.61■□□□□ 0.25
Sh3tc2Q80VA5 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3tc2Q80VA5 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3tc2Q80VA5 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3tc2Q80VA5 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.61■□□□□ 0.25
Sh3tc2Q80VA5 Rprl2-201ENSMUST00000157150 290 ntBASIC16.61■□□□□ 0.25
Sh3tc2Q80VA5 Gm20553-201ENSMUST00000204205 844 ntBASIC16.61■□□□□ 0.25
Sh3tc2Q80VA5 Thap2-203ENSMUST00000218989 527 ntBASIC16.61■□□□□ 0.25
Sh3tc2Q80VA5 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.61■□□□□ 0.25
Sh3tc2Q80VA5 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3tc2Q80VA5 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3tc2Q80VA5 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3tc2Q80VA5 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3tc2Q80VA5 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3tc2Q80VA5 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3tc2Q80VA5 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Sh3tc2Q80VA5 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3tc2Q80VA5 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3tc2Q80VA5 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3tc2Q80VA5 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3tc2Q80VA5 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.6■□□□□ 0.25
Sh3tc2Q80VA5 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3tc2Q80VA5 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3tc2Q80VA5 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3tc2Q80VA5 Prob1-201ENSMUST00000097619 3021 ntBASIC16.6■□□□□ 0.25
Sh3tc2Q80VA5 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3tc2Q80VA5 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3tc2Q80VA5 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3tc2Q80VA5 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.6■□□□□ 0.25
Sh3tc2Q80VA5 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.6■□□□□ 0.25
Sh3tc2Q80VA5 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.6■□□□□ 0.25
Sh3tc2Q80VA5 Gm22175-201ENSMUST00000175007 78 ntBASIC16.6■□□□□ 0.25
Sh3tc2Q80VA5 Gm43125-201ENSMUST00000201724 730 ntBASIC16.6■□□□□ 0.25
Sh3tc2Q80VA5 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3tc2Q80VA5 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.6■□□□□ 0.25
Sh3tc2Q80VA5 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.6■□□□□ 0.25
Sh3tc2Q80VA5 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.6■□□□□ 0.25
Sh3tc2Q80VA5 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3tc2Q80VA5 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Sh3tc2Q80VA5 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3tc2Q80VA5 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3tc2Q80VA5 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3tc2Q80VA5 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3tc2Q80VA5 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3tc2Q80VA5 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.59■□□□□ 0.25
Sh3tc2Q80VA5 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3tc2Q80VA5 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3tc2Q80VA5 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.59■□□□□ 0.25
Sh3tc2Q80VA5 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3tc2Q80VA5 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms