Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sp140Q6NSQ5 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sp140Q6NSQ5 Efs-202ENSMUST00000227037 2540 ntBASIC15.53■□□□□ 0.08
Sp140Q6NSQ5 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Sp140Q6NSQ5 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sp140Q6NSQ5 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Sp140Q6NSQ5 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.52■□□□□ 0.08
Sp140Q6NSQ5 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sp140Q6NSQ5 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.52■□□□□ 0.08
Sp140Q6NSQ5 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sp140Q6NSQ5 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sp140Q6NSQ5 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Sp140Q6NSQ5 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sp140Q6NSQ5 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.52■□□□□ 0.08
Sp140Q6NSQ5 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sp140Q6NSQ5 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sp140Q6NSQ5 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sp140Q6NSQ5 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Sp140Q6NSQ5 Gm13418-201ENSMUST00000119097 944 ntBASIC15.52■□□□□ 0.08
Sp140Q6NSQ5 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Sp140Q6NSQ5 Gm4535-201ENSMUST00000182274 558 ntBASIC15.52■□□□□ 0.08
Sp140Q6NSQ5 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.52■□□□□ 0.08
Sp140Q6NSQ5 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.52■□□□□ 0.08
Sp140Q6NSQ5 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.52■□□□□ 0.08
Sp140Q6NSQ5 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sp140Q6NSQ5 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sp140Q6NSQ5 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sp140Q6NSQ5 Gm10355-201ENSMUST00000097146 517 ntBASIC15.52■□□□□ 0.08
Sp140Q6NSQ5 Gm10819-201ENSMUST00000099988 561 ntBASIC15.52■□□□□ 0.08
Sp140Q6NSQ5 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Sp140Q6NSQ5 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sp140Q6NSQ5 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Sp140Q6NSQ5 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Sp140Q6NSQ5 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Sp140Q6NSQ5 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sp140Q6NSQ5 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Sp140Q6NSQ5 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sp140Q6NSQ5 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sp140Q6NSQ5 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 Gm8318-201ENSMUST00000182954 872 ntBASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 Birc2-201ENSMUST00000054878 378 ntBASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
Sp140Q6NSQ5 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sp140Q6NSQ5 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sp140Q6NSQ5 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.5■□□□□ 0.07
Sp140Q6NSQ5 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Sp140Q6NSQ5 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.5■□□□□ 0.07
Sp140Q6NSQ5 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sp140Q6NSQ5 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sp140Q6NSQ5 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sp140Q6NSQ5 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sp140Q6NSQ5 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.5■□□□□ 0.07
Sp140Q6NSQ5 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.5■□□□□ 0.07
Sp140Q6NSQ5 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sp140Q6NSQ5 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sp140Q6NSQ5 Gm43347-201ENSMUST00000200226 580 ntBASIC15.5■□□□□ 0.07
Sp140Q6NSQ5 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.5■□□□□ 0.07
Sp140Q6NSQ5 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sp140Q6NSQ5 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sp140Q6NSQ5 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Sp140Q6NSQ5 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Sp140Q6NSQ5 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Sp140Q6NSQ5 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sp140Q6NSQ5 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sp140Q6NSQ5 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sp140Q6NSQ5 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sp140Q6NSQ5 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sp140Q6NSQ5 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sp140Q6NSQ5 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sp140Q6NSQ5 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sp140Q6NSQ5 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Sp140Q6NSQ5 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.49■□□□□ 0.07
Sp140Q6NSQ5 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sp140Q6NSQ5 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms