Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm1P58771 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm1P58771 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm1P58771 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm1P58771 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm1P58771 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm1P58771 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm1P58771 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.07■□□□□ 0.32
Tpm1P58771 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm1P58771 Gm22697-201ENSMUST00000175194 63 ntBASIC17.07■□□□□ 0.32
Tpm1P58771 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm1P58771 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.07■□□□□ 0.32
Tpm1P58771 Gm18101-201ENSMUST00000215769 548 ntBASIC17.07■□□□□ 0.32
Tpm1P58771 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm1P58771 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm1P58771 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm1P58771 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm1P58771 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm1P58771 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm1P58771 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.07■□□□□ 0.32
Tpm1P58771 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm1P58771 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm1P58771 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm1P58771 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm1P58771 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm1P58771 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm1P58771 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm1P58771 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm1P58771 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm1P58771 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm1P58771 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Tpm1P58771 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm1P58771 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Tpm1P58771 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm1P58771 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm1P58771 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm1P58771 Gm44291-201ENSMUST00000203102 2865 ntBASIC17.06■□□□□ 0.32
Tpm1P58771 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC17.06■□□□□ 0.32
Tpm1P58771 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Tpm1P58771 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm1P58771 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm1P58771 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.06■□□□□ 0.32
Tpm1P58771 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm1P58771 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Tpm1P58771 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.06■□□□□ 0.32
Tpm1P58771 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm1P58771 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Tpm1P58771 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.06■□□□□ 0.32
Tpm1P58771 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm1P58771 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm1P58771 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.06■□□□□ 0.32
Tpm1P58771 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm1P58771 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.06■□□□□ 0.32
Tpm1P58771 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm1P58771 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm1P58771 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm1P58771 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm1P58771 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Tpm1P58771 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Tpm1P58771 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm1P58771 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.05■□□□□ 0.32
Tpm1P58771 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm1P58771 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.05■□□□□ 0.32
Tpm1P58771 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.05■□□□□ 0.32
Tpm1P58771 Gm9987-201ENSMUST00000069768 567 ntBASIC17.05■□□□□ 0.32
Tpm1P58771 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Tpm1P58771 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm1P58771 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Tpm1P58771 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm1P58771 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm1P58771 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Tpm1P58771 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm1P58771 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tpm1P58771 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tpm1P58771 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Tpm1P58771 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tpm1P58771 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tpm1P58771 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC17.04■□□□□ 0.32
Tpm1P58771 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tpm1P58771 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tpm1P58771 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tpm1P58771 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tpm1P58771 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tpm1P58771 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tpm1P58771 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tpm1P58771 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tpm1P58771 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tpm1P58771 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC17.04■□□□□ 0.32
Tpm1P58771 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Tpm1P58771 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.04■□□□□ 0.32
Tpm1P58771 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm1P58771 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm1P58771 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm1P58771 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm1P58771 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm1P58771 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Tpm1P58771 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Tpm1P58771 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.03■□□□□ 0.32
Tpm1P58771 Ksr1-207ENSMUST00000226282 5260 ntBASIC17.03■□□□□ 0.32
Tpm1P58771 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms