Protein–RNA interactions for Protein: P58404

Strn4, Striatin-4, mousemouse

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Strn4P58404 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Strn4P58404 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Strn4P58404 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Strn4P58404 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC19.17■□□□□ 0.66
Strn4P58404 Gm18057-201ENSMUST00000208220 503 ntBASIC19.17■□□□□ 0.66
Strn4P58404 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Strn4P58404 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Strn4P58404 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Strn4P58404 Gm13337-201ENSMUST00000119183 1594 ntBASIC19.17■□□□□ 0.66
Strn4P58404 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Strn4P58404 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Strn4P58404 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Strn4P58404 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Strn4P58404 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Strn4P58404 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Strn4P58404 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Strn4P58404 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Strn4P58404 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Strn4P58404 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Strn4P58404 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Strn4P58404 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Strn4P58404 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Strn4P58404 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Strn4P58404 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Strn4P58404 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC19.16■□□□□ 0.66
Strn4P58404 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Strn4P58404 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Strn4P58404 Gm27622-201ENSMUST00000183779 60 ntBASIC19.16■□□□□ 0.66
Strn4P58404 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Strn4P58404 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC19.16■□□□□ 0.66
Strn4P58404 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC19.16■□□□□ 0.66
Strn4P58404 AC160980.1-201ENSMUST00000224136 970 ntBASIC19.16■□□□□ 0.66
Strn4P58404 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Strn4P58404 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Strn4P58404 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Strn4P58404 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Strn4P58404 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Strn4P58404 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Strn4P58404 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.16■□□□□ 0.66
Strn4P58404 Gm42473-201ENSMUST00000201056 2291 ntBASIC19.16■□□□□ 0.66
Strn4P58404 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Strn4P58404 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC19.15■□□□□ 0.66
Strn4P58404 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Strn4P58404 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Strn4P58404 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Strn4P58404 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Strn4P58404 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Strn4P58404 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Strn4P58404 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Strn4P58404 Gm7669-201ENSMUST00000210184 1603 ntBASIC19.15■□□□□ 0.66
Strn4P58404 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Strn4P58404 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Strn4P58404 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Strn4P58404 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Strn4P58404 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC19.15■□□□□ 0.66
Strn4P58404 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC19.15■□□□□ 0.66
Strn4P58404 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Strn4P58404 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Strn4P58404 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC19.15■□□□□ 0.66
Strn4P58404 Gm5779-201ENSMUST00000218467 910 ntBASIC19.15■□□□□ 0.66
Strn4P58404 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Strn4P58404 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Strn4P58404 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Strn4P58404 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Strn4P58404 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Strn4P58404 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC19.15■□□□□ 0.66
Strn4P58404 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Strn4P58404 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Strn4P58404 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Strn4P58404 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Strn4P58404 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Strn4P58404 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Strn4P58404 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Strn4P58404 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Strn4P58404 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Strn4P58404 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Strn4P58404 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Strn4P58404 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Strn4P58404 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Strn4P58404 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Strn4P58404 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Strn4P58404 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Strn4P58404 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Strn4P58404 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC19.14■□□□□ 0.65
Strn4P58404 Gm24158-201ENSMUST00000175263 71 ntBASIC19.14■□□□□ 0.65
Strn4P58404 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC19.14■□□□□ 0.65
Strn4P58404 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Strn4P58404 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Strn4P58404 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC19.14■□□□□ 0.65
Strn4P58404 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Strn4P58404 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Strn4P58404 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Strn4P58404 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Strn4P58404 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Strn4P58404 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Strn4P58404 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Strn4P58404 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.14■□□□□ 0.65
Strn4P58404 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Strn4P58404 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Strn4P58404 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms