Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
Pcdh9F8VPK8 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.67■□□□□ 0.1
Pcdh9F8VPK8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh9F8VPK8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Pcdh9F8VPK8 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdh9F8VPK8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh9F8VPK8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh9F8VPK8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh9F8VPK8 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh9F8VPK8 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.67■□□□□ 0.1
Pcdh9F8VPK8 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdh9F8VPK8 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh9F8VPK8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh9F8VPK8 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Pcdh9F8VPK8 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Pcdh9F8VPK8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh9F8VPK8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.67■□□□□ 0.1
Pcdh9F8VPK8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh9F8VPK8 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Pcdh9F8VPK8 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh9F8VPK8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh9F8VPK8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh9F8VPK8 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh9F8VPK8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh9F8VPK8 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pcdh9F8VPK8 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh9F8VPK8 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.65■□□□□ 0.1
Pcdh9F8VPK8 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh9F8VPK8 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh9F8VPK8 Gm15358-201ENSMUST00000119249 520 ntBASIC15.65■□□□□ 0.1
Pcdh9F8VPK8 Gm9103-201ENSMUST00000119371 405 ntBASIC15.65■□□□□ 0.1
Pcdh9F8VPK8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdh9F8VPK8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh9F8VPK8 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh9F8VPK8 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh9F8VPK8 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh9F8VPK8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdh9F8VPK8 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh9F8VPK8 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh9F8VPK8 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh9F8VPK8 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdh9F8VPK8 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh9F8VPK8 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh9F8VPK8 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Pcdh9F8VPK8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh9F8VPK8 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh9F8VPK8 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdh9F8VPK8 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh9F8VPK8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh9F8VPK8 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Pcdh9F8VPK8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdh9F8VPK8 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdh9F8VPK8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh9F8VPK8 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Pcdh9F8VPK8 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdh9F8VPK8 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh9F8VPK8 Gm8318-201ENSMUST00000182954 872 ntBASIC15.64■□□□□ 0.09
Pcdh9F8VPK8 Gm28033-201ENSMUST00000184224 96 ntBASIC15.64■□□□□ 0.09
Pcdh9F8VPK8 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.64■□□□□ 0.09
Pcdh9F8VPK8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.64■□□□□ 0.09
Pcdh9F8VPK8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.64■□□□□ 0.09
Pcdh9F8VPK8 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh9F8VPK8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pcdh9F8VPK8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh9F8VPK8 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh9F8VPK8 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh9F8VPK8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pcdh9F8VPK8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh9F8VPK8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh9F8VPK8 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh9F8VPK8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms