Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12-1A0N8R1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Trav12-1A0N8R1 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.77□□□□□ -0.37
Trav12-1A0N8R1 AA414768-201ENSMUST00000121924 1257 ntBASIC12.77□□□□□ -0.37
Trav12-1A0N8R1 Olfr129-201ENSMUST00000122318 993 ntBASIC12.77□□□□□ -0.37
Trav12-1A0N8R1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Trav12-1A0N8R1 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.77□□□□□ -0.37
Trav12-1A0N8R1 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.77□□□□□ -0.37
Trav12-1A0N8R1 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.77□□□□□ -0.37
Trav12-1A0N8R1 Gm18622-201ENSMUST00000219361 595 ntBASIC12.77□□□□□ -0.37
Trav12-1A0N8R1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12-1A0N8R1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12-1A0N8R1 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12-1A0N8R1 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav12-1A0N8R1 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12-1A0N8R1 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Trav12-1A0N8R1 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12-1A0N8R1 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12-1A0N8R1 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12-1A0N8R1 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12-1A0N8R1 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12-1A0N8R1 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12-1A0N8R1 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12-1A0N8R1 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12-1A0N8R1 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12-1A0N8R1 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav12-1A0N8R1 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Gm27742-201ENSMUST00000184667 60 ntBASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-1A0N8R1 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Gm15165-201ENSMUST00000118140 502 ntBASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Gm12497-201ENSMUST00000138778 237 ntBASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms