Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Gm11950-201ENSMUST00000121615 838 ntBASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-1A0N8R0 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Rprl3-201ENSMUST00000157400 290 ntBASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Trav12d-1A0N8R0 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-1A0N8R0 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-1A0N8R0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-1A0N8R0 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav12d-1A0N8R0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-1A0N8R0 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-1A0N8R0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-1A0N8R0 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-1A0N8R0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-1A0N8R0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-1A0N8R0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trav12d-1A0N8R0 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.29□□□□□ -0.44
Trav12d-1A0N8R0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav12d-1A0N8R0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav12d-1A0N8R0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-1A0N8R0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-1A0N8R0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-1A0N8R0 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-1A0N8R0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms