Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.15□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9n-2A0A0G2JDP3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC11.15□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gm9103-201ENSMUST00000119371 405 ntBASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gm8344-201ENSMUST00000119813 856 ntBASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gm5837-201ENSMUST00000191844 1369 ntBASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms