Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-5A0A075B6B5 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Gm4217-201ENSMUST00000182243 1002 ntBASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Gm7556-201ENSMUST00000201178 1084 ntBASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-5A0A075B6B5 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav6-5A0A075B6B5 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Trav6-5A0A075B6B5 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Gm7213-201ENSMUST00000215977 950 ntBASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 CT009713.7-201ENSMUST00000224689 571 ntBASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 AC114585.2-202ENSMUST00000228094 426 ntBASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-5A0A075B6B5 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms