Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Gm14722-201ENSMUST00000118943 689 ntBASIC19.17■□□□□ 0.66
Chmp5Q9D7S9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.17■□□□□ 0.66
Chmp5Q9D7S9 Gm30437-201ENSMUST00000206086 1201 ntBASIC19.17■□□□□ 0.66
Chmp5Q9D7S9 AC160980.1-201ENSMUST00000224136 970 ntBASIC19.17■□□□□ 0.66
Chmp5Q9D7S9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Chmp5Q9D7S9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp5Q9D7S9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp5Q9D7S9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp5Q9D7S9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp5Q9D7S9 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp5Q9D7S9 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp5Q9D7S9 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp5Q9D7S9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Chmp5Q9D7S9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp5Q9D7S9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp5Q9D7S9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp5Q9D7S9 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp5Q9D7S9 Gm14780-201ENSMUST00000118387 2737 ntBASIC19.16■□□□□ 0.66
Chmp5Q9D7S9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp5Q9D7S9 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp5Q9D7S9 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.16■□□□□ 0.66
Chmp5Q9D7S9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp5Q9D7S9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp5Q9D7S9 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp5Q9D7S9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp5Q9D7S9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp5Q9D7S9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp5Q9D7S9 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp5Q9D7S9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp5Q9D7S9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp5Q9D7S9 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.16■□□□□ 0.66
Chmp5Q9D7S9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp5Q9D7S9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp5Q9D7S9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp5Q9D7S9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp5Q9D7S9 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp5Q9D7S9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp5Q9D7S9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Chmp5Q9D7S9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC19.15■□□□□ 0.66
Chmp5Q9D7S9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp5Q9D7S9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp5Q9D7S9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Chmp5Q9D7S9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp5Q9D7S9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.15■□□□□ 0.66
Chmp5Q9D7S9 Gm10252-201ENSMUST00000209541 832 ntBASIC19.15■□□□□ 0.66
Chmp5Q9D7S9 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp5Q9D7S9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp5Q9D7S9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC19.15■□□□□ 0.66
Chmp5Q9D7S9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp5Q9D7S9 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp5Q9D7S9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp5Q9D7S9 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Chmp5Q9D7S9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp5Q9D7S9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp5Q9D7S9 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Chmp5Q9D7S9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.66
Chmp5Q9D7S9 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Chmp5Q9D7S9 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Chmp5Q9D7S9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp5Q9D7S9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp5Q9D7S9 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Chmp5Q9D7S9 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp5Q9D7S9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
Chmp5Q9D7S9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.14■□□□□ 0.65
Chmp5Q9D7S9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Chmp5Q9D7S9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp5Q9D7S9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.14■□□□□ 0.65
Chmp5Q9D7S9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp5Q9D7S9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp5Q9D7S9 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC19.14■□□□□ 0.65
Chmp5Q9D7S9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp5Q9D7S9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp5Q9D7S9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Chmp5Q9D7S9 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp5Q9D7S9 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp5Q9D7S9 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp5Q9D7S9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp5Q9D7S9 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp5Q9D7S9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Chmp5Q9D7S9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp5Q9D7S9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp5Q9D7S9 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp5Q9D7S9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Chmp5Q9D7S9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp5Q9D7S9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Chmp5Q9D7S9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC19.13■□□□□ 0.65
Chmp5Q9D7S9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp5Q9D7S9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp5Q9D7S9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp5Q9D7S9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp5Q9D7S9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp5Q9D7S9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp5Q9D7S9 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp5Q9D7S9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp5Q9D7S9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp5Q9D7S9 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp5Q9D7S9 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp5Q9D7S9 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp5Q9D7S9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp5Q9D7S9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms