Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ssr1Q9CY50 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Ssr1Q9CY50 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ssr1Q9CY50 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssr1Q9CY50 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.64■□□□□ 0.25
Ssr1Q9CY50 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ssr1Q9CY50 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.64■□□□□ 0.25
Ssr1Q9CY50 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssr1Q9CY50 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ssr1Q9CY50 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssr1Q9CY50 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssr1Q9CY50 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssr1Q9CY50 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssr1Q9CY50 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ssr1Q9CY50 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssr1Q9CY50 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssr1Q9CY50 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssr1Q9CY50 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssr1Q9CY50 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ssr1Q9CY50 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.64■□□□□ 0.25
Ssr1Q9CY50 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ssr1Q9CY50 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssr1Q9CY50 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ssr1Q9CY50 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssr1Q9CY50 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ssr1Q9CY50 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssr1Q9CY50 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssr1Q9CY50 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssr1Q9CY50 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ssr1Q9CY50 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.63■□□□□ 0.25
Ssr1Q9CY50 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.63■□□□□ 0.25
Ssr1Q9CY50 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.63■□□□□ 0.25
Ssr1Q9CY50 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ssr1Q9CY50 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Ssr1Q9CY50 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ssr1Q9CY50 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssr1Q9CY50 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ssr1Q9CY50 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssr1Q9CY50 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Ssr1Q9CY50 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.63■□□□□ 0.25
Ssr1Q9CY50 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ssr1Q9CY50 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.63■□□□□ 0.25
Ssr1Q9CY50 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssr1Q9CY50 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ssr1Q9CY50 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssr1Q9CY50 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ssr1Q9CY50 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ssr1Q9CY50 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssr1Q9CY50 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ssr1Q9CY50 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssr1Q9CY50 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssr1Q9CY50 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssr1Q9CY50 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ssr1Q9CY50 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssr1Q9CY50 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssr1Q9CY50 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ssr1Q9CY50 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.61■□□□□ 0.25
Ssr1Q9CY50 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.61■□□□□ 0.25
Ssr1Q9CY50 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssr1Q9CY50 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssr1Q9CY50 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ssr1Q9CY50 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssr1Q9CY50 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssr1Q9CY50 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms