Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 MFAP1P1-201ENST00000442257 1255 ntBASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 SLC25A1P4-201ENST00000567977 778 ntBASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 AC096733.2-201ENST00000609937 1394 ntBASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 AC100803.2-201ENST00000562459 1963 ntBASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 AC034236.2-201ENST00000606662 1610 ntBASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 RARRES2P10-201ENST00000564312 460 ntBASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHAMP1Q96JM3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC21.11■□□□□ 0.97
CHAMP1Q96JM3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC21.11■□□□□ 0.97
CHAMP1Q96JM3 AL163051.1-201ENST00000569214 1512 ntBASIC21.11■□□□□ 0.97
CHAMP1Q96JM3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHAMP1Q96JM3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHAMP1Q96JM3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHAMP1Q96JM3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.11■□□□□ 0.97
CHAMP1Q96JM3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHAMP1Q96JM3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHAMP1Q96JM3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHAMP1Q96JM3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.11■□□□□ 0.97
CHAMP1Q96JM3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.11■□□□□ 0.97
CHAMP1Q96JM3 CD177P1-201ENST00000606252 935 ntBASIC21.11■□□□□ 0.97
CHAMP1Q96JM3 AL355312.1-201ENST00000407115 2176 ntBASIC21.11■□□□□ 0.97
CHAMP1Q96JM3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CHAMP1Q96JM3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CHAMP1Q96JM3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.11■□□□□ 0.97
CHAMP1Q96JM3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHAMP1Q96JM3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CHAMP1Q96JM3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.11■□□□□ 0.97
CHAMP1Q96JM3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHAMP1Q96JM3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.11■□□□□ 0.97
CHAMP1Q96JM3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.1■□□□□ 0.97
CHAMP1Q96JM3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHAMP1Q96JM3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHAMP1Q96JM3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CHAMP1Q96JM3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CHAMP1Q96JM3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHAMP1Q96JM3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHAMP1Q96JM3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
CHAMP1Q96JM3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHAMP1Q96JM3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC21.1■□□□□ 0.97
CHAMP1Q96JM3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHAMP1Q96JM3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.1■□□□□ 0.97
CHAMP1Q96JM3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.1■□□□□ 0.97
CHAMP1Q96JM3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHAMP1Q96JM3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.1■□□□□ 0.97
CHAMP1Q96JM3 AL353807.1-201ENST00000427475 662 ntBASIC21.1■□□□□ 0.97
CHAMP1Q96JM3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHAMP1Q96JM3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.1■□□□□ 0.97
CHAMP1Q96JM3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.1■□□□□ 0.97
CHAMP1Q96JM3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC21.1■□□□□ 0.97
CHAMP1Q96JM3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHAMP1Q96JM3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC21.1■□□□□ 0.97
CHAMP1Q96JM3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms