Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb22Q91XZ8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb22Q91XZ8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdhb22Q91XZ8 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.84■□□□□ 0.45
Pcdhb22Q91XZ8 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb22Q91XZ8 Gm14140-201ENSMUST00000119999 995 ntBASIC17.84■□□□□ 0.45
Pcdhb22Q91XZ8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb22Q91XZ8 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhb22Q91XZ8 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.84■□□□□ 0.45
Pcdhb22Q91XZ8 Gm44771-201ENSMUST00000206975 626 ntBASIC17.84■□□□□ 0.45
Pcdhb22Q91XZ8 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb22Q91XZ8 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhb22Q91XZ8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Pcdhb22Q91XZ8 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb22Q91XZ8 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhb22Q91XZ8 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Pcdhb22Q91XZ8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb22Q91XZ8 Celf4-206ENSMUST00000224553 1729 ntBASIC17.84■□□□□ 0.45
Pcdhb22Q91XZ8 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb22Q91XZ8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb22Q91XZ8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb22Q91XZ8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Pcdhb22Q91XZ8 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.83■□□□□ 0.44
Pcdhb22Q91XZ8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Pcdhb22Q91XZ8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb22Q91XZ8 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.83■□□□□ 0.44
Pcdhb22Q91XZ8 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb22Q91XZ8 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb22Q91XZ8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb22Q91XZ8 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb22Q91XZ8 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb22Q91XZ8 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.83■□□□□ 0.44
Pcdhb22Q91XZ8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhb22Q91XZ8 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb22Q91XZ8 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb22Q91XZ8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb22Q91XZ8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.83■□□□□ 0.44
Pcdhb22Q91XZ8 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb22Q91XZ8 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb22Q91XZ8 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb22Q91XZ8 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb22Q91XZ8 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb22Q91XZ8 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Pcdhb22Q91XZ8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb22Q91XZ8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb22Q91XZ8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb22Q91XZ8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb22Q91XZ8 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb22Q91XZ8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb22Q91XZ8 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
Pcdhb22Q91XZ8 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhb22Q91XZ8 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb22Q91XZ8 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb22Q91XZ8 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhb22Q91XZ8 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb22Q91XZ8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhb22Q91XZ8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb22Q91XZ8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb22Q91XZ8 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb22Q91XZ8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb22Q91XZ8 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.81■□□□□ 0.44
Pcdhb22Q91XZ8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb22Q91XZ8 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb22Q91XZ8 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhb22Q91XZ8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms