Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01006Q8NI28 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC01006Q8NI28 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01006Q8NI28 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01006Q8NI28 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LINC01006Q8NI28 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01006Q8NI28 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
LINC01006Q8NI28 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
LINC01006Q8NI28 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01006Q8NI28 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LINC01006Q8NI28 MIR940-201ENST00000401276 94 ntBASIC14.14□□□□□ -0.15
LINC01006Q8NI28 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC01006Q8NI28 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC01006Q8NI28 AC092865.5-201ENST00000545435 363 ntBASIC14.14□□□□□ -0.15
LINC01006Q8NI28 AC021087.4-201ENST00000563761 564 ntBASIC14.14□□□□□ -0.15
LINC01006Q8NI28 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.14□□□□□ -0.15
LINC01006Q8NI28 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC01006Q8NI28 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01006Q8NI28 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01006Q8NI28 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
LINC01006Q8NI28 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
LINC01006Q8NI28 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01006Q8NI28 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01006Q8NI28 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01006Q8NI28 PTGES2-AS1-201ENST00000443493 2100 ntBASIC14.14□□□□□ -0.15
LINC01006Q8NI28 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01006Q8NI28 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC01006Q8NI28 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC01006Q8NI28 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC01006Q8NI28 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01006Q8NI28 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 SART3-203ENST00000546611 1184 ntBASIC14.12□□□□□ -0.15
LINC01006Q8NI28 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC01006Q8NI28 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 AL356309.3-201ENST00000624132 1934 ntBASIC14.11□□□□□ -0.15
LINC01006Q8NI28 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms