Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF248Q8NDW4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF248Q8NDW4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ZNF248Q8NDW4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.4■□□□□ 0.38
ZNF248Q8NDW4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF248Q8NDW4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ZNF248Q8NDW4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ZNF248Q8NDW4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF248Q8NDW4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF248Q8NDW4 RPL13AP23-201ENST00000480739 586 ntBASIC17.4■□□□□ 0.38
ZNF248Q8NDW4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ZNF248Q8NDW4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.4■□□□□ 0.38
ZNF248Q8NDW4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
ZNF248Q8NDW4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF248Q8NDW4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF248Q8NDW4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF248Q8NDW4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF248Q8NDW4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ZNF248Q8NDW4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF248Q8NDW4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF248Q8NDW4 AL353692.3-201ENST00000407031 1396 ntBASIC17.4■□□□□ 0.38
ZNF248Q8NDW4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF248Q8NDW4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ZNF248Q8NDW4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ZNF248Q8NDW4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ZNF248Q8NDW4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
ZNF248Q8NDW4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
ZNF248Q8NDW4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF248Q8NDW4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF248Q8NDW4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF248Q8NDW4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF248Q8NDW4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF248Q8NDW4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.39■□□□□ 0.37
ZNF248Q8NDW4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.39■□□□□ 0.37
ZNF248Q8NDW4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
ZNF248Q8NDW4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF248Q8NDW4 AC139887.3-201ENST00000568585 713 ntBASIC17.39■□□□□ 0.37
ZNF248Q8NDW4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.39■□□□□ 0.37
ZNF248Q8NDW4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
ZNF248Q8NDW4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
ZNF248Q8NDW4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.39■□□□□ 0.37
ZNF248Q8NDW4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF248Q8NDW4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF248Q8NDW4 AC243591.1-201ENST00000452967 1364 ntBASIC17.39■□□□□ 0.37
ZNF248Q8NDW4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF248Q8NDW4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
ZNF248Q8NDW4 AL512353.2-201ENST00000448759 1962 ntBASIC17.39■□□□□ 0.37
ZNF248Q8NDW4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 MIR564-202ENST00000385049 94 ntBASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 AC073648.2-201ENST00000510116 352 ntBASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 MIR5100-201ENST00000579544 119 ntBASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 AC008608.2-201ENST00000606089 416 ntBASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 AC148477.8-201ENST00000624298 468 ntBASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 BX323043.1-201ENST00000641006 1765 ntBASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF248Q8NDW4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF248Q8NDW4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF248Q8NDW4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.37■□□□□ 0.37
ZNF248Q8NDW4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.37■□□□□ 0.37
ZNF248Q8NDW4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF248Q8NDW4 AC018445.3-201ENST00000624177 1945 ntBASIC17.37■□□□□ 0.37
ZNF248Q8NDW4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ZNF248Q8NDW4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.37■□□□□ 0.37
ZNF248Q8NDW4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF248Q8NDW4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.37■□□□□ 0.37
ZNF248Q8NDW4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.37■□□□□ 0.37
ZNF248Q8NDW4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF248Q8NDW4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms