Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc28bQ8CEG5 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc28bQ8CEG5 Gm45058-201ENSMUST00000205810 766 ntBASIC15.16■□□□□ 0.02
Ccdc28bQ8CEG5 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.16■□□□□ 0.02
Ccdc28bQ8CEG5 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.16■□□□□ 0.02
Ccdc28bQ8CEG5 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc28bQ8CEG5 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc28bQ8CEG5 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc28bQ8CEG5 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc28bQ8CEG5 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ccdc28bQ8CEG5 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc28bQ8CEG5 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc28bQ8CEG5 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc28bQ8CEG5 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc28bQ8CEG5 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc28bQ8CEG5 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc28bQ8CEG5 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.15■□□□□ 0.02
Ccdc28bQ8CEG5 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.15■□□□□ 0.02
Ccdc28bQ8CEG5 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc28bQ8CEG5 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc28bQ8CEG5 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc28bQ8CEG5 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc28bQ8CEG5 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc28bQ8CEG5 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc28bQ8CEG5 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Ccdc28bQ8CEG5 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.15■□□□□ 0.02
Ccdc28bQ8CEG5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.15■□□□□ 0.02
Ccdc28bQ8CEG5 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc28bQ8CEG5 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc28bQ8CEG5 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc28bQ8CEG5 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc28bQ8CEG5 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc28bQ8CEG5 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc28bQ8CEG5 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc28bQ8CEG5 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc28bQ8CEG5 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.15■□□□□ 0.02
Ccdc28bQ8CEG5 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc28bQ8CEG5 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc28bQ8CEG5 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc28bQ8CEG5 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc28bQ8CEG5 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc28bQ8CEG5 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc28bQ8CEG5 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Ccdc28bQ8CEG5 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc28bQ8CEG5 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc28bQ8CEG5 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.14■□□□□ 0.01
Ccdc28bQ8CEG5 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.14■□□□□ 0.01
Ccdc28bQ8CEG5 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ccdc28bQ8CEG5 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc28bQ8CEG5 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Ccdc28bQ8CEG5 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ccdc28bQ8CEG5 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ccdc28bQ8CEG5 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc28bQ8CEG5 Gm27389-201ENSMUST00000183622 195 ntBASIC15.14■□□□□ 0.01
Ccdc28bQ8CEG5 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.14■□□□□ 0.01
Ccdc28bQ8CEG5 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.14■□□□□ 0.01
Ccdc28bQ8CEG5 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.14■□□□□ 0.01
Ccdc28bQ8CEG5 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc28bQ8CEG5 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc28bQ8CEG5 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.14■□□□□ 0.01
Ccdc28bQ8CEG5 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc28bQ8CEG5 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc28bQ8CEG5 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc28bQ8CEG5 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.13■□□□□ 0.01
Ccdc28bQ8CEG5 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Ccdc28bQ8CEG5 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc28bQ8CEG5 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc28bQ8CEG5 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc28bQ8CEG5 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc28bQ8CEG5 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc28bQ8CEG5 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc28bQ8CEG5 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc28bQ8CEG5 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.13■□□□□ 0.01
Ccdc28bQ8CEG5 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc28bQ8CEG5 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc28bQ8CEG5 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc28bQ8CEG5 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.13■□□□□ 0.01
Ccdc28bQ8CEG5 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.13■□□□□ 0.01
Ccdc28bQ8CEG5 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc28bQ8CEG5 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
Ccdc28bQ8CEG5 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc28bQ8CEG5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc28bQ8CEG5 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc28bQ8CEG5 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc28bQ8CEG5 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc28bQ8CEG5 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc28bQ8CEG5 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc28bQ8CEG5 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc28bQ8CEG5 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc28bQ8CEG5 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.13■□□□□ 0.01
Ccdc28bQ8CEG5 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms