Protein–RNA interactions for Protein: Q6PHS6

Snx13, Sorting nexin-13, mousemouse

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx13Q6PHS6 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snx13Q6PHS6 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Snx13Q6PHS6 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snx13Q6PHS6 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snx13Q6PHS6 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Snx13Q6PHS6 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Snx13Q6PHS6 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx13Q6PHS6 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
Snx13Q6PHS6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx13Q6PHS6 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx13Q6PHS6 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Snx13Q6PHS6 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx13Q6PHS6 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx13Q6PHS6 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Snx13Q6PHS6 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Snx13Q6PHS6 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx13Q6PHS6 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Snx13Q6PHS6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Snx13Q6PHS6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Snx13Q6PHS6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Snx13Q6PHS6 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.32■□□□□ 0.36
Snx13Q6PHS6 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.32■□□□□ 0.36
Snx13Q6PHS6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx13Q6PHS6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Snx13Q6PHS6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx13Q6PHS6 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx13Q6PHS6 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx13Q6PHS6 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Snx13Q6PHS6 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Snx13Q6PHS6 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Snx13Q6PHS6 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx13Q6PHS6 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Snx13Q6PHS6 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx13Q6PHS6 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx13Q6PHS6 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.32■□□□□ 0.36
Snx13Q6PHS6 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Grk6-207ENSMUST00000225925 2769 ntBASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Snx13Q6PHS6 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx13Q6PHS6 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx13Q6PHS6 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx13Q6PHS6 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx13Q6PHS6 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx13Q6PHS6 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx13Q6PHS6 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx13Q6PHS6 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx13Q6PHS6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Snx13Q6PHS6 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Snx13Q6PHS6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Snx13Q6PHS6 Gm25406-201ENSMUST00000157599 105 ntBASIC17.3■□□□□ 0.36
Snx13Q6PHS6 Gm18101-201ENSMUST00000215769 548 ntBASIC17.3■□□□□ 0.36
Snx13Q6PHS6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.3■□□□□ 0.36
Snx13Q6PHS6 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.3■□□□□ 0.36
Snx13Q6PHS6 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx13Q6PHS6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx13Q6PHS6 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx13Q6PHS6 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx13Q6PHS6 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx13Q6PHS6 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx13Q6PHS6 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx13Q6PHS6 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17.29■□□□□ 0.36
Snx13Q6PHS6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Snx13Q6PHS6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.29■□□□□ 0.36
Snx13Q6PHS6 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx13Q6PHS6 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx13Q6PHS6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx13Q6PHS6 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx13Q6PHS6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx13Q6PHS6 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Snx13Q6PHS6 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Snx13Q6PHS6 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Snx13Q6PHS6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms