Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ShbQ6PD21 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ShbQ6PD21 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ShbQ6PD21 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
ShbQ6PD21 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
ShbQ6PD21 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.38■□□□□ 0.21
ShbQ6PD21 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.38■□□□□ 0.21
ShbQ6PD21 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ShbQ6PD21 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.38■□□□□ 0.21
ShbQ6PD21 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ShbQ6PD21 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ShbQ6PD21 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ShbQ6PD21 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ShbQ6PD21 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
ShbQ6PD21 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ShbQ6PD21 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ShbQ6PD21 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ShbQ6PD21 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ShbQ6PD21 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ShbQ6PD21 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.38■□□□□ 0.21
ShbQ6PD21 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ShbQ6PD21 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ShbQ6PD21 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ShbQ6PD21 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ShbQ6PD21 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ShbQ6PD21 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ShbQ6PD21 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ShbQ6PD21 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ShbQ6PD21 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
ShbQ6PD21 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
ShbQ6PD21 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
ShbQ6PD21 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ShbQ6PD21 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.37■□□□□ 0.21
ShbQ6PD21 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ShbQ6PD21 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.37■□□□□ 0.21
ShbQ6PD21 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.37■□□□□ 0.21
ShbQ6PD21 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.37■□□□□ 0.21
ShbQ6PD21 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.37■□□□□ 0.21
ShbQ6PD21 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ShbQ6PD21 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ShbQ6PD21 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.37■□□□□ 0.21
ShbQ6PD21 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ShbQ6PD21 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ShbQ6PD21 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
ShbQ6PD21 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ShbQ6PD21 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ShbQ6PD21 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ShbQ6PD21 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ShbQ6PD21 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ShbQ6PD21 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ShbQ6PD21 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ShbQ6PD21 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ShbQ6PD21 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
ShbQ6PD21 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ShbQ6PD21 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
ShbQ6PD21 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
ShbQ6PD21 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
ShbQ6PD21 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ShbQ6PD21 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ShbQ6PD21 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.36■□□□□ 0.21
ShbQ6PD21 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.36■□□□□ 0.21
ShbQ6PD21 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ShbQ6PD21 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ShbQ6PD21 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ShbQ6PD21 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ShbQ6PD21 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ShbQ6PD21 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ShbQ6PD21 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ShbQ6PD21 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ShbQ6PD21 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
ShbQ6PD21 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
ShbQ6PD21 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ShbQ6PD21 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
ShbQ6PD21 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ShbQ6PD21 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ShbQ6PD21 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ShbQ6PD21 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ShbQ6PD21 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ShbQ6PD21 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ShbQ6PD21 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ShbQ6PD21 Mir1982-201ENSMUST00000157368 74 ntBASIC16.35■□□□□ 0.21
ShbQ6PD21 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ShbQ6PD21 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ShbQ6PD21 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.35■□□□□ 0.21
ShbQ6PD21 Gm9229-201ENSMUST00000222777 126 ntBASIC16.35■□□□□ 0.21
ShbQ6PD21 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ShbQ6PD21 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ShbQ6PD21 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
ShbQ6PD21 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.35■□□□□ 0.21
ShbQ6PD21 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ShbQ6PD21 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ShbQ6PD21 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ShbQ6PD21 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ShbQ6PD21 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ShbQ6PD21 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ShbQ6PD21 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ShbQ6PD21 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ShbQ6PD21 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ShbQ6PD21 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.34■□□□□ 0.21
ShbQ6PD21 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms