Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Timm23-208ENSMUST00000226683 750 ntBASIC18.38■□□□□ 0.53
Mre11Q61216 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Mre11Q61216 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Mre11Q61216 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mre11Q61216 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mre11Q61216 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mre11Q61216 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mre11Q61216 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Mre11Q61216 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mre11Q61216 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mre11Q61216 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Mre11Q61216 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mre11Q61216 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.38■□□□□ 0.53
Mre11Q61216 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Mre11Q61216 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mre11Q61216 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mre11Q61216 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mre11Q61216 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mre11Q61216 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mre11Q61216 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mre11Q61216 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Mre11Q61216 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Mre11Q61216 Gm10698-201ENSMUST00000182663 604 ntBASIC18.37■□□□□ 0.53
Mre11Q61216 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.37■□□□□ 0.53
Mre11Q61216 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Mre11Q61216 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC18.37■□□□□ 0.53
Mre11Q61216 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mre11Q61216 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mre11Q61216 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mre11Q61216 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mre11Q61216 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mre11Q61216 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Mre11Q61216 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mre11Q61216 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mre11Q61216 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.36■□□□□ 0.53
Mre11Q61216 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mre11Q61216 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Mre11Q61216 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.36■□□□□ 0.53
Mre11Q61216 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Mre11Q61216 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Mre11Q61216 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mre11Q61216 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mre11Q61216 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mre11Q61216 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mre11Q61216 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Mre11Q61216 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Mre11Q61216 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mre11Q61216 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mre11Q61216 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mre11Q61216 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mre11Q61216 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mre11Q61216 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Mre11Q61216 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mre11Q61216 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Mre11Q61216 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mre11Q61216 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mre11Q61216 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mre11Q61216 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mre11Q61216 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Mre11Q61216 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mre11Q61216 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mre11Q61216 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mre11Q61216 Gm38391-201ENSMUST00000191720 4069 ntBASIC18.35■□□□□ 0.53
Mre11Q61216 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Mre11Q61216 Gm12008-201ENSMUST00000117791 755 ntBASIC18.35■□□□□ 0.53
Mre11Q61216 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Mre11Q61216 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.35■□□□□ 0.53
Mre11Q61216 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.35■□□□□ 0.53
Mre11Q61216 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Mre11Q61216 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mre11Q61216 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mre11Q61216 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Mre11Q61216 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mre11Q61216 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Mre11Q61216 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Mre11Q61216 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Mre11Q61216 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Mre11Q61216 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Mre11Q61216 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mre11Q61216 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.34■□□□□ 0.53
Mre11Q61216 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Mre11Q61216 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mre11Q61216 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mre11Q61216 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Mre11Q61216 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mre11Q61216 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Mre11Q61216 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC18.34■□□□□ 0.53
Mre11Q61216 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.34■□□□□ 0.53
Mre11Q61216 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mre11Q61216 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Mre11Q61216 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mre11Q61216 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mre11Q61216 Ntrk2-209ENSMUST00000225950 2640 ntBASIC18.34■□□□□ 0.53
Mre11Q61216 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Mre11Q61216 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Mre11Q61216 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Mre11Q61216 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Mre11Q61216 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Mre11Q61216 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Mre11Q61216 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms