Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Prpf38aQ4FK66 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prpf38aQ4FK66 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Prpf38aQ4FK66 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prpf38aQ4FK66 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Prpf38aQ4FK66 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf38aQ4FK66 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf38aQ4FK66 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf38aQ4FK66 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.83■□□□□ 0.44
Prpf38aQ4FK66 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf38aQ4FK66 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.83■□□□□ 0.44
Prpf38aQ4FK66 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.83■□□□□ 0.44
Prpf38aQ4FK66 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.83■□□□□ 0.44
Prpf38aQ4FK66 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.83■□□□□ 0.44
Prpf38aQ4FK66 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf38aQ4FK66 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.83■□□□□ 0.44
Prpf38aQ4FK66 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.83■□□□□ 0.44
Prpf38aQ4FK66 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf38aQ4FK66 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf38aQ4FK66 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf38aQ4FK66 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf38aQ4FK66 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf38aQ4FK66 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf38aQ4FK66 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf38aQ4FK66 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf38aQ4FK66 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf38aQ4FK66 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.82■□□□□ 0.44
Prpf38aQ4FK66 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Prpf38aQ4FK66 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf38aQ4FK66 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Prpf38aQ4FK66 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf38aQ4FK66 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.82■□□□□ 0.44
Prpf38aQ4FK66 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.82■□□□□ 0.44
Prpf38aQ4FK66 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.82■□□□□ 0.44
Prpf38aQ4FK66 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.82■□□□□ 0.44
Prpf38aQ4FK66 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.82■□□□□ 0.44
Prpf38aQ4FK66 Gm10154-201ENSMUST00000084445 354 ntBASIC17.82■□□□□ 0.44
Prpf38aQ4FK66 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf38aQ4FK66 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf38aQ4FK66 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf38aQ4FK66 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf38aQ4FK66 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Prpf38aQ4FK66 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Prpf38aQ4FK66 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf38aQ4FK66 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf38aQ4FK66 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf38aQ4FK66 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf38aQ4FK66 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf38aQ4FK66 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.81■□□□□ 0.44
Prpf38aQ4FK66 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Prpf38aQ4FK66 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Prpf38aQ4FK66 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf38aQ4FK66 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Prpf38aQ4FK66 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf38aQ4FK66 Gm13365-201ENSMUST00000121188 973 ntBASIC17.81■□□□□ 0.44
Prpf38aQ4FK66 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Prpf38aQ4FK66 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf38aQ4FK66 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.81■□□□□ 0.44
Prpf38aQ4FK66 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf38aQ4FK66 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.81■□□□□ 0.44
Prpf38aQ4FK66 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf38aQ4FK66 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf38aQ4FK66 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.8■□□□□ 0.44
Prpf38aQ4FK66 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf38aQ4FK66 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf38aQ4FK66 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf38aQ4FK66 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Prpf38aQ4FK66 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf38aQ4FK66 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf38aQ4FK66 Dancr-204ENSMUST00000132389 2347 ntBASIC17.8■□□□□ 0.44
Prpf38aQ4FK66 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf38aQ4FK66 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.8■□□□□ 0.44
Prpf38aQ4FK66 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.8■□□□□ 0.44
Prpf38aQ4FK66 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.8■□□□□ 0.44
Prpf38aQ4FK66 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.8■□□□□ 0.44
Prpf38aQ4FK66 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Prpf38aQ4FK66 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.8■□□□□ 0.44
Prpf38aQ4FK66 Gm8396-201ENSMUST00000057361 823 ntBASIC17.8■□□□□ 0.44
Prpf38aQ4FK66 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Prpf38aQ4FK66 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf38aQ4FK66 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf38aQ4FK66 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Prpf38aQ4FK66 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf38aQ4FK66 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf38aQ4FK66 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf38aQ4FK66 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf38aQ4FK66 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf38aQ4FK66 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.8■□□□□ 0.44
Prpf38aQ4FK66 Prob1-201ENSMUST00000097619 3021 ntBASIC17.8■□□□□ 0.44
Prpf38aQ4FK66 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.79■□□□□ 0.44
Prpf38aQ4FK66 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Prpf38aQ4FK66 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf38aQ4FK66 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf38aQ4FK66 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf38aQ4FK66 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf38aQ4FK66 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Prpf38aQ4FK66 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.79■□□□□ 0.44
Prpf38aQ4FK66 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms