Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rrp1P56183 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Rrp1P56183 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rrp1P56183 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rrp1P56183 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rrp1P56183 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rrp1P56183 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.29■□□□□ 0.36
Rrp1P56183 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.29■□□□□ 0.36
Rrp1P56183 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.29■□□□□ 0.36
Rrp1P56183 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.29■□□□□ 0.36
Rrp1P56183 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.29■□□□□ 0.36
Rrp1P56183 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.29■□□□□ 0.36
Rrp1P56183 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rrp1P56183 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rrp1P56183 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rrp1P56183 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rrp1P56183 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rrp1P56183 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rrp1P56183 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rrp1P56183 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rrp1P56183 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rrp1P56183 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rrp1P56183 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rrp1P56183 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Rrp1P56183 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rrp1P56183 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rrp1P56183 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rrp1P56183 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rrp1P56183 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rrp1P56183 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rrp1P56183 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.28■□□□□ 0.36
Rrp1P56183 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rrp1P56183 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rrp1P56183 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rrp1P56183 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rrp1P56183 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rrp1P56183 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rrp1P56183 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rrp1P56183 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rrp1P56183 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rrp1P56183 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
Rrp1P56183 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rrp1P56183 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rrp1P56183 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rrp1P56183 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rrp1P56183 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.28■□□□□ 0.36
Rrp1P56183 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rrp1P56183 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rrp1P56183 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rrp1P56183 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rrp1P56183 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Rrp1P56183 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rrp1P56183 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rrp1P56183 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rrp1P56183 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rrp1P56183 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rrp1P56183 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.27■□□□□ 0.36
Rrp1P56183 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Rrp1P56183 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rrp1P56183 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rrp1P56183 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rrp1P56183 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rrp1P56183 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rrp1P56183 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rrp1P56183 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rrp1P56183 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.26■□□□□ 0.35
Rrp1P56183 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rrp1P56183 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rrp1P56183 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rrp1P56183 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rrp1P56183 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rrp1P56183 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rrp1P56183 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Rrp1P56183 Gm12134-201ENSMUST00000122109 520 ntBASIC17.26■□□□□ 0.35
Rrp1P56183 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rrp1P56183 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.26■□□□□ 0.35
Rrp1P56183 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.26■□□□□ 0.35
Rrp1P56183 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.26■□□□□ 0.35
Rrp1P56183 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.26■□□□□ 0.35
Rrp1P56183 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rrp1P56183 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rrp1P56183 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rrp1P56183 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rrp1P56183 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.26■□□□□ 0.35
Rrp1P56183 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.26■□□□□ 0.35
Rrp1P56183 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rrp1P56183 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rrp1P56183 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rrp1P56183 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rrp1P56183 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rrp1P56183 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rrp1P56183 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.25■□□□□ 0.35
Rrp1P56183 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rrp1P56183 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.25■□□□□ 0.35
Rrp1P56183 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rrp1P56183 Olfr129-201ENSMUST00000122318 993 ntBASIC17.25■□□□□ 0.35
Rrp1P56183 Gm7284-201ENSMUST00000131667 944 ntBASIC17.25■□□□□ 0.35
Rrp1P56183 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Rrp1P56183 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.25■□□□□ 0.35
Rrp1P56183 Gm18622-201ENSMUST00000219361 595 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms