Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox3P53784 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox3P53784 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox3P53784 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox3P53784 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox3P53784 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox3P53784 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.67□□□□□ -0.06
Sox3P53784 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox3P53784 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox3P53784 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox3P53784 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Sox3P53784 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sox3P53784 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Sox3P53784 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Sox3P53784 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox3P53784 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.67□□□□□ -0.06
Sox3P53784 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox3P53784 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox3P53784 Gm20949-201ENSMUST00000206478 952 ntBASIC14.67□□□□□ -0.06
Sox3P53784 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox3P53784 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox3P53784 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sox3P53784 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox3P53784 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.67□□□□□ -0.06
Sox3P53784 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sox3P53784 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox3P53784 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox3P53784 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox3P53784 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sox3P53784 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Sox3P53784 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.66□□□□□ -0.06
Sox3P53784 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox3P53784 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox3P53784 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox3P53784 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox3P53784 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox3P53784 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox3P53784 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox3P53784 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox3P53784 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox3P53784 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox3P53784 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sox3P53784 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox3P53784 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox3P53784 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox3P53784 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.66□□□□□ -0.06
Sox3P53784 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.66□□□□□ -0.06
Sox3P53784 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.66□□□□□ -0.06
Sox3P53784 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Sox3P53784 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.66□□□□□ -0.06
Sox3P53784 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox3P53784 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.66□□□□□ -0.06
Sox3P53784 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.66□□□□□ -0.06
Sox3P53784 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox3P53784 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox3P53784 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox3P53784 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Sox3P53784 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox3P53784 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox3P53784 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox3P53784 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox3P53784 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox3P53784 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox3P53784 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox3P53784 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox3P53784 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox3P53784 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox3P53784 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox3P53784 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Sox3P53784 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox3P53784 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox3P53784 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Sox3P53784 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox3P53784 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox3P53784 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox3P53784 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox3P53784 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox3P53784 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox3P53784 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox3P53784 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox3P53784 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox3P53784 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox3P53784 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox3P53784 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox3P53784 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox3P53784 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox3P53784 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox3P53784 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox3P53784 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox3P53784 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox3P53784 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox3P53784 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox3P53784 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox3P53784 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.65□□□□□ -0.06
Sox3P53784 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox3P53784 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox3P53784 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.65□□□□□ -0.06
Sox3P53784 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
Sox3P53784 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
Sox3P53784 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms