Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TnfP06804 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TnfP06804 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TnfP06804 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TnfP06804 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TnfP06804 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.21■□□□□ 0.19
TnfP06804 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TnfP06804 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TnfP06804 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.21■□□□□ 0.19
TnfP06804 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TnfP06804 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TnfP06804 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TnfP06804 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TnfP06804 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TnfP06804 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TnfP06804 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TnfP06804 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.21■□□□□ 0.19
TnfP06804 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.21■□□□□ 0.19
TnfP06804 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.21■□□□□ 0.19
TnfP06804 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.21■□□□□ 0.19
TnfP06804 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TnfP06804 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TnfP06804 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TnfP06804 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TnfP06804 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
TnfP06804 Dancr-204ENSMUST00000132389 2347 ntBASIC16.2■□□□□ 0.18
TnfP06804 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.2■□□□□ 0.18
TnfP06804 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TnfP06804 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TnfP06804 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TnfP06804 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TnfP06804 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TnfP06804 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TnfP06804 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
TnfP06804 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.2■□□□□ 0.18
TnfP06804 Mir1895-201ENSMUST00000122615 79 ntBASIC16.2■□□□□ 0.18
TnfP06804 Gm27494-201ENSMUST00000184735 189 ntBASIC16.2■□□□□ 0.18
TnfP06804 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.2■□□□□ 0.18
TnfP06804 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.2■□□□□ 0.18
TnfP06804 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TnfP06804 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TnfP06804 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TnfP06804 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TnfP06804 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TnfP06804 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TnfP06804 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TnfP06804 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TnfP06804 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TnfP06804 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TnfP06804 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.19■□□□□ 0.18
TnfP06804 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TnfP06804 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TnfP06804 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TnfP06804 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TnfP06804 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.19■□□□□ 0.18
TnfP06804 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.19■□□□□ 0.18
TnfP06804 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TnfP06804 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.19■□□□□ 0.18
TnfP06804 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.19■□□□□ 0.18
TnfP06804 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.19■□□□□ 0.18
TnfP06804 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.19■□□□□ 0.18
TnfP06804 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.19■□□□□ 0.18
TnfP06804 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.19■□□□□ 0.18
TnfP06804 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.19■□□□□ 0.18
TnfP06804 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TnfP06804 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.19■□□□□ 0.18
TnfP06804 Gm10154-201ENSMUST00000084445 354 ntBASIC16.19■□□□□ 0.18
TnfP06804 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TnfP06804 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.19■□□□□ 0.18
TnfP06804 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TnfP06804 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TnfP06804 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TnfP06804 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TnfP06804 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TnfP06804 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TnfP06804 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TnfP06804 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TnfP06804 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.18■□□□□ 0.18
TnfP06804 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TnfP06804 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
TnfP06804 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TnfP06804 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.18■□□□□ 0.18
TnfP06804 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TnfP06804 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TnfP06804 Gm11025-201ENSMUST00000140773 466 ntBASIC16.18■□□□□ 0.18
TnfP06804 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.18■□□□□ 0.18
TnfP06804 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TnfP06804 Gm20553-201ENSMUST00000204205 844 ntBASIC16.18■□□□□ 0.18
TnfP06804 Gm45612-201ENSMUST00000211320 160 ntBASIC16.18■□□□□ 0.18
TnfP06804 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.18■□□□□ 0.18
TnfP06804 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TnfP06804 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TnfP06804 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TnfP06804 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TnfP06804 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TnfP06804 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TnfP06804 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.18■□□□□ 0.18
TnfP06804 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.18■□□□□ 0.18
TnfP06804 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TnfP06804 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms