Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.04■□□□□ 0.48
Slc4a4O88343 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.04■□□□□ 0.48
Slc4a4O88343 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.04■□□□□ 0.48
Slc4a4O88343 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc4a4O88343 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc4a4O88343 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Slc4a4O88343 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slc4a4O88343 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc4a4O88343 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.04■□□□□ 0.48
Slc4a4O88343 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc4a4O88343 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc4a4O88343 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc4a4O88343 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc4a4O88343 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc4a4O88343 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc4a4O88343 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Slc4a4O88343 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc4a4O88343 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc4a4O88343 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Slc4a4O88343 Gm5177-201ENSMUST00000183092 997 ntBASIC18.03■□□□□ 0.48
Slc4a4O88343 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc4a4O88343 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.03■□□□□ 0.48
Slc4a4O88343 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Slc4a4O88343 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc4a4O88343 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Slc4a4O88343 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.03■□□□□ 0.48
Slc4a4O88343 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc4a4O88343 Gm5867-201ENSMUST00000063197 592 ntBASIC18.03■□□□□ 0.48
Slc4a4O88343 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc4a4O88343 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.03■□□□□ 0.48
Slc4a4O88343 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc4a4O88343 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc4a4O88343 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc4a4O88343 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc4a4O88343 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Slc4a4O88343 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.03■□□□□ 0.48
Slc4a4O88343 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Slc4a4O88343 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Slc4a4O88343 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc4a4O88343 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.02■□□□□ 0.48
Slc4a4O88343 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Slc4a4O88343 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Slc4a4O88343 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
Slc4a4O88343 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Slc4a4O88343 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Slc4a4O88343 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18.02■□□□□ 0.48
Slc4a4O88343 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc4a4O88343 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Slc4a4O88343 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.02■□□□□ 0.48
Slc4a4O88343 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc4a4O88343 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Slc4a4O88343 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Slc4a4O88343 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.02■□□□□ 0.48
Slc4a4O88343 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Slc4a4O88343 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc4a4O88343 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc4a4O88343 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc4a4O88343 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc4a4O88343 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Slc4a4O88343 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc4a4O88343 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc4a4O88343 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc4a4O88343 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc4a4O88343 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc4a4O88343 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Slc4a4O88343 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Slc4a4O88343 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc4a4O88343 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc4a4O88343 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc4a4O88343 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc4a4O88343 Gm12008-201ENSMUST00000117791 755 ntBASIC18.01■□□□□ 0.47
Slc4a4O88343 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Slc4a4O88343 Gm45747-201ENSMUST00000212203 999 ntBASIC18.01■□□□□ 0.47
Slc4a4O88343 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc4a4O88343 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc4a4O88343 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Slc4a4O88343 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc4a4O88343 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.01■□□□□ 0.47
Slc4a4O88343 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Slc4a4O88343 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc4a4O88343 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc4a4O88343 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc4a4O88343 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Slc4a4O88343 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.01■□□□□ 0.47
Slc4a4O88343 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Slc4a4O88343 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC18■□□□□ 0.47
Slc4a4O88343 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc4a4O88343 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc4a4O88343 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18■□□□□ 0.47
Slc4a4O88343 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18■□□□□ 0.47
Slc4a4O88343 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18■□□□□ 0.47
Slc4a4O88343 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Slc4a4O88343 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18■□□□□ 0.47
Slc4a4O88343 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18■□□□□ 0.47
Slc4a4O88343 Gm27528-202ENSMUST00000222916 2012 ntBASIC18■□□□□ 0.47
Slc4a4O88343 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc4a4O88343 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18■□□□□ 0.47
Slc4a4O88343 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Slc4a4O88343 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc4a4O88343 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms