Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.24■□□□□ 0.35
Stx1aO35526 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stx1aO35526 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Stx1aO35526 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stx1aO35526 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Stx1aO35526 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.24■□□□□ 0.35
Stx1aO35526 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stx1aO35526 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stx1aO35526 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stx1aO35526 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.24■□□□□ 0.35
Stx1aO35526 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Stx1aO35526 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.24■□□□□ 0.35
Stx1aO35526 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stx1aO35526 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stx1aO35526 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Stx1aO35526 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Stx1aO35526 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Stx1aO35526 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Stx1aO35526 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Stx1aO35526 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.23■□□□□ 0.35
Stx1aO35526 Gm5587-201ENSMUST00000206270 674 ntBASIC17.23■□□□□ 0.35
Stx1aO35526 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Stx1aO35526 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Stx1aO35526 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Stx1aO35526 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Stx1aO35526 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Stx1aO35526 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.23■□□□□ 0.35
Stx1aO35526 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Stx1aO35526 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Stx1aO35526 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Stx1aO35526 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Stx1aO35526 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Stx1aO35526 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Stx1aO35526 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Stx1aO35526 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Stx1aO35526 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Stx1aO35526 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Stx1aO35526 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Stx1aO35526 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Stx1aO35526 Gm11950-201ENSMUST00000121615 838 ntBASIC17.22■□□□□ 0.35
Stx1aO35526 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Stx1aO35526 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.22■□□□□ 0.35
Stx1aO35526 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Stx1aO35526 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Stx1aO35526 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Stx1aO35526 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Stx1aO35526 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Stx1aO35526 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Stx1aO35526 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Stx1aO35526 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Stx1aO35526 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Stx1aO35526 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Stx1aO35526 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Stx1aO35526 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Stx1aO35526 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Stx1aO35526 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Stx1aO35526 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.21■□□□□ 0.35
Stx1aO35526 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Stx1aO35526 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Stx1aO35526 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Stx1aO35526 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Stx1aO35526 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.21■□□□□ 0.35
Stx1aO35526 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.21■□□□□ 0.35
Stx1aO35526 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Stx1aO35526 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.21■□□□□ 0.35
Stx1aO35526 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Stx1aO35526 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.21■□□□□ 0.35
Stx1aO35526 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Stx1aO35526 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Stx1aO35526 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Stx1aO35526 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stx1aO35526 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stx1aO35526 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Stx1aO35526 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
Stx1aO35526 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.2■□□□□ 0.34
Stx1aO35526 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stx1aO35526 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
Stx1aO35526 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stx1aO35526 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stx1aO35526 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.2■□□□□ 0.34
Stx1aO35526 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stx1aO35526 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Stx1aO35526 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stx1aO35526 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stx1aO35526 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.2■□□□□ 0.34
Stx1aO35526 Gm45328-201ENSMUST00000210942 917 ntBASIC17.2■□□□□ 0.34
Stx1aO35526 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Stx1aO35526 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.2■□□□□ 0.34
Stx1aO35526 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stx1aO35526 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stx1aO35526 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stx1aO35526 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Stx1aO35526 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.2■□□□□ 0.34
Stx1aO35526 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.2■□□□□ 0.34
Stx1aO35526 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stx1aO35526 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stx1aO35526 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stx1aO35526 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Stx1aO35526 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Stx1aO35526 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms