Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34bJ3QNR8 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.67■□□□□ 0.58
Trim34bJ3QNR8 Mir6956-201ENSMUST00000183598 62 ntBASIC18.67■□□□□ 0.58
Trim34bJ3QNR8 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34bJ3QNR8 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim34bJ3QNR8 Gm43474-201ENSMUST00000196415 774 ntBASIC18.67■□□□□ 0.58
Trim34bJ3QNR8 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC18.67■□□□□ 0.58
Trim34bJ3QNR8 Gm18057-201ENSMUST00000208220 503 ntBASIC18.67■□□□□ 0.58
Trim34bJ3QNR8 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.67■□□□□ 0.58
Trim34bJ3QNR8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34bJ3QNR8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
Trim34bJ3QNR8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34bJ3QNR8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34bJ3QNR8 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34bJ3QNR8 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34bJ3QNR8 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim34bJ3QNR8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim34bJ3QNR8 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Trim34bJ3QNR8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim34bJ3QNR8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim34bJ3QNR8 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim34bJ3QNR8 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim34bJ3QNR8 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim34bJ3QNR8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim34bJ3QNR8 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim34bJ3QNR8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Trim34bJ3QNR8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Trim34bJ3QNR8 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trim34bJ3QNR8 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim34bJ3QNR8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trim34bJ3QNR8 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC18.66■□□□□ 0.58
Trim34bJ3QNR8 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.66■□□□□ 0.58
Trim34bJ3QNR8 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim34bJ3QNR8 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Trim34bJ3QNR8 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim34bJ3QNR8 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim34bJ3QNR8 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim34bJ3QNR8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim34bJ3QNR8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trim34bJ3QNR8 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim34bJ3QNR8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim34bJ3QNR8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim34bJ3QNR8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim34bJ3QNR8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim34bJ3QNR8 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim34bJ3QNR8 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC18.65■□□□□ 0.58
Trim34bJ3QNR8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trim34bJ3QNR8 Nudt18-203ENSMUST00000228768 1578 ntBASIC18.65■□□□□ 0.58
Trim34bJ3QNR8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trim34bJ3QNR8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim34bJ3QNR8 Gm12017-201ENSMUST00000122453 1003 ntBASIC18.65■□□□□ 0.58
Trim34bJ3QNR8 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Trim34bJ3QNR8 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trim34bJ3QNR8 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim34bJ3QNR8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.65■□□□□ 0.58
Trim34bJ3QNR8 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim34bJ3QNR8 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim34bJ3QNR8 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim34bJ3QNR8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim34bJ3QNR8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Trim34bJ3QNR8 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34bJ3QNR8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34bJ3QNR8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34bJ3QNR8 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34bJ3QNR8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34bJ3QNR8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34bJ3QNR8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC18.64■□□□□ 0.57
Trim34bJ3QNR8 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34bJ3QNR8 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC18.64■□□□□ 0.57
Trim34bJ3QNR8 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC18.64■□□□□ 0.57
Trim34bJ3QNR8 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34bJ3QNR8 AC140397.2-201ENSMUST00000224213 834 ntBASIC18.64■□□□□ 0.57
Trim34bJ3QNR8 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC18.64■□□□□ 0.57
Trim34bJ3QNR8 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Trim34bJ3QNR8 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34bJ3QNR8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34bJ3QNR8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34bJ3QNR8 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34bJ3QNR8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim34bJ3QNR8 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim34bJ3QNR8 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.63■□□□□ 0.57
Trim34bJ3QNR8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim34bJ3QNR8 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Trim34bJ3QNR8 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim34bJ3QNR8 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trim34bJ3QNR8 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.63■□□□□ 0.57
Trim34bJ3QNR8 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC18.63■□□□□ 0.57
Trim34bJ3QNR8 CT030684.1-201ENSMUST00000227292 914 ntBASIC18.63■□□□□ 0.57
Trim34bJ3QNR8 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim34bJ3QNR8 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim34bJ3QNR8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim34bJ3QNR8 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim34bJ3QNR8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim34bJ3QNR8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim34bJ3QNR8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim34bJ3QNR8 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim34bJ3QNR8 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim34bJ3QNR8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim34bJ3QNR8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim34bJ3QNR8 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms