Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Gm25016-201ENSMUST00000158399 131 ntBASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Gm6623-201ENSMUST00000173570 544 ntBASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pcdh1F7BJK1 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Pcdh1F7BJK1 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh1F7BJK1 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.79□□□□□ -0.2
Pcdh1F7BJK1 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh1F7BJK1 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdh1F7BJK1 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh1F7BJK1 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdh1F7BJK1 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.79□□□□□ -0.2
Pcdh1F7BJK1 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh1F7BJK1 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Pcdh1F7BJK1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pcdh1F7BJK1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh1F7BJK1 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.79□□□□□ -0.2
Pcdh1F7BJK1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh1F7BJK1 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.79□□□□□ -0.2
Pcdh1F7BJK1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh1F7BJK1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh1F7BJK1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pcdh1F7BJK1 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh1F7BJK1 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdh1F7BJK1 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Pcdh1F7BJK1 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh1F7BJK1 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh1F7BJK1 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh1F7BJK1 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh1F7BJK1 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh1F7BJK1 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh1F7BJK1 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh1F7BJK1 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh1F7BJK1 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh1F7BJK1 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Pcdh1F7BJK1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh1F7BJK1 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh1F7BJK1 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.78□□□□□ -0.2
Pcdh1F7BJK1 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh1F7BJK1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
Pcdh1F7BJK1 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh1F7BJK1 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.78□□□□□ -0.2
Pcdh1F7BJK1 Gm5587-201ENSMUST00000206270 674 ntBASIC13.78□□□□□ -0.2
Pcdh1F7BJK1 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.78□□□□□ -0.2
Pcdh1F7BJK1 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh1F7BJK1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh1F7BJK1 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh1F7BJK1 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh1F7BJK1 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh1F7BJK1 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh1F7BJK1 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdh1F7BJK1 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh1F7BJK1 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh1F7BJK1 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh1F7BJK1 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh1F7BJK1 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh1F7BJK1 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh1F7BJK1 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Pcdh1F7BJK1 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Pcdh1F7BJK1 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Gm13312-201ENSMUST00000119631 718 ntBASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh1F7BJK1 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms