Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.54□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.52□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Gm12134-201ENSMUST00000122109 520 ntBASIC12.52□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Gm25406-201ENSMUST00000157599 105 ntBASIC12.52□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.52□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms