Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.02□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.02□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.02□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm18032-201ENSMUST00000222541 538 ntBASIC13.02□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms