Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Gm7153-201ENSMUST00000117092 455 ntBASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Gm8344-201ENSMUST00000119813 856 ntBASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Gm19164-201ENSMUST00000210667 640 ntBASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClcnkaQ9WUB7 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ClcnkaQ9WUB7 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.12□□□□□ -0.15
ClcnkaQ9WUB7 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClcnkaQ9WUB7 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClcnkaQ9WUB7 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.12□□□□□ -0.15
ClcnkaQ9WUB7 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClcnkaQ9WUB7 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms