Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd1lQ9CXF7 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd1lQ9CXF7 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Chd1lQ9CXF7 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd1lQ9CXF7 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
Chd1lQ9CXF7 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1lQ9CXF7 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1lQ9CXF7 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1lQ9CXF7 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1lQ9CXF7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.36■□□□□ 0.37
Chd1lQ9CXF7 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.36■□□□□ 0.37
Chd1lQ9CXF7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1lQ9CXF7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Chd1lQ9CXF7 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.36■□□□□ 0.37
Chd1lQ9CXF7 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1lQ9CXF7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1lQ9CXF7 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1lQ9CXF7 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1lQ9CXF7 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1lQ9CXF7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Chd1lQ9CXF7 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1lQ9CXF7 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1lQ9CXF7 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1lQ9CXF7 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1lQ9CXF7 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC17.36■□□□□ 0.37
Chd1lQ9CXF7 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1lQ9CXF7 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1lQ9CXF7 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1lQ9CXF7 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1lQ9CXF7 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1lQ9CXF7 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
Chd1lQ9CXF7 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1lQ9CXF7 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1lQ9CXF7 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1lQ9CXF7 Gm21451-201ENSMUST00000111062 2775 ntBASIC17.35■□□□□ 0.37
Chd1lQ9CXF7 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1lQ9CXF7 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1lQ9CXF7 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1lQ9CXF7 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1lQ9CXF7 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1lQ9CXF7 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1lQ9CXF7 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1lQ9CXF7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1lQ9CXF7 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.35■□□□□ 0.37
Chd1lQ9CXF7 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.35■□□□□ 0.37
Chd1lQ9CXF7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Chd1lQ9CXF7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.35■□□□□ 0.37
Chd1lQ9CXF7 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.35■□□□□ 0.37
Chd1lQ9CXF7 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1lQ9CXF7 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1lQ9CXF7 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Chd1lQ9CXF7 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chd1lQ9CXF7 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
Chd1lQ9CXF7 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1lQ9CXF7 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1lQ9CXF7 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1lQ9CXF7 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
Chd1lQ9CXF7 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Chd1lQ9CXF7 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1lQ9CXF7 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1lQ9CXF7 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.34■□□□□ 0.37
Chd1lQ9CXF7 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1lQ9CXF7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1lQ9CXF7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1lQ9CXF7 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Chd1lQ9CXF7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1lQ9CXF7 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1lQ9CXF7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1lQ9CXF7 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1lQ9CXF7 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1lQ9CXF7 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1lQ9CXF7 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1lQ9CXF7 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1lQ9CXF7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1lQ9CXF7 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1lQ9CXF7 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1lQ9CXF7 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1lQ9CXF7 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1lQ9CXF7 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1lQ9CXF7 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1lQ9CXF7 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chd1lQ9CXF7 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Chd1lQ9CXF7 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Chd1lQ9CXF7 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chd1lQ9CXF7 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chd1lQ9CXF7 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chd1lQ9CXF7 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chd1lQ9CXF7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd1lQ9CXF7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chd1lQ9CXF7 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Chd1lQ9CXF7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.33■□□□□ 0.36
Chd1lQ9CXF7 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Chd1lQ9CXF7 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd1lQ9CXF7 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd1lQ9CXF7 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chd1lQ9CXF7 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Chd1lQ9CXF7 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd1lQ9CXF7 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd1lQ9CXF7 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Chd1lQ9CXF7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms