Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Pcdhga4Q91XY4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga4Q91XY4 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhga4Q91XY4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga4Q91XY4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhga4Q91XY4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga4Q91XY4 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga4Q91XY4 Gm7222-201ENSMUST00000117512 906 ntBASIC15.13■□□□□ 0.01
Pcdhga4Q91XY4 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhga4Q91XY4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Pcdhga4Q91XY4 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.13■□□□□ 0.01
Pcdhga4Q91XY4 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.13■□□□□ 0.01
Pcdhga4Q91XY4 Gm18622-201ENSMUST00000219361 595 ntBASIC15.13■□□□□ 0.01
Pcdhga4Q91XY4 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga4Q91XY4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga4Q91XY4 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga4Q91XY4 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga4Q91XY4 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga4Q91XY4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga4Q91XY4 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga4Q91XY4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga4Q91XY4 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhga4Q91XY4 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhga4Q91XY4 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga4Q91XY4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga4Q91XY4 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga4Q91XY4 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga4Q91XY4 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga4Q91XY4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga4Q91XY4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Pcdhga4Q91XY4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.12■□□□□ 0.01
Pcdhga4Q91XY4 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdhga4Q91XY4 Gm6089-201ENSMUST00000197666 938 ntBASIC15.12■□□□□ 0.01
Pcdhga4Q91XY4 Gm2651-201ENSMUST00000203560 838 ntBASIC15.12■□□□□ 0.01
Pcdhga4Q91XY4 Gm6443-201ENSMUST00000203599 874 ntBASIC15.12■□□□□ 0.01
Pcdhga4Q91XY4 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga4Q91XY4 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Pcdhga4Q91XY4 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhga4Q91XY4 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga4Q91XY4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga4Q91XY4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdhga4Q91XY4 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga4Q91XY4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga4Q91XY4 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga4Q91XY4 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga4Q91XY4 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga4Q91XY4 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.11■□□□□ 0.01
Pcdhga4Q91XY4 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga4Q91XY4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga4Q91XY4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga4Q91XY4 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga4Q91XY4 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga4Q91XY4 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.11■□□□□ 0.01
Pcdhga4Q91XY4 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Pcdhga4Q91XY4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdhga4Q91XY4 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.11■□□□□ 0.01
Pcdhga4Q91XY4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhga4Q91XY4 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga4Q91XY4 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga4Q91XY4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga4Q91XY4 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga4Q91XY4 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.11■□□□□ 0.01
Pcdhga4Q91XY4 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Pcdhga4Q91XY4 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga4Q91XY4 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga4Q91XY4 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhga4Q91XY4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga4Q91XY4 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga4Q91XY4 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga4Q91XY4 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Gm11780-201ENSMUST00000136880 516 ntBASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms