Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.31■□□□□ 0.2
Usp1Q8BJQ2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.31■□□□□ 0.2
Usp1Q8BJQ2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp1Q8BJQ2 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp1Q8BJQ2 Gm5177-201ENSMUST00000183092 997 ntBASIC16.31■□□□□ 0.2
Usp1Q8BJQ2 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp1Q8BJQ2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.31■□□□□ 0.2
Usp1Q8BJQ2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp1Q8BJQ2 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.31■□□□□ 0.2
Usp1Q8BJQ2 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp1Q8BJQ2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp1Q8BJQ2 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp1Q8BJQ2 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp1Q8BJQ2 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Usp1Q8BJQ2 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp1Q8BJQ2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp1Q8BJQ2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.31■□□□□ 0.2
Usp1Q8BJQ2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Usp1Q8BJQ2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp1Q8BJQ2 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 Gm15427-201ENSMUST00000117288 531 ntBASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 Gm45612-201ENSMUST00000211320 160 ntBASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp1Q8BJQ2 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp1Q8BJQ2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp1Q8BJQ2 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp1Q8BJQ2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp1Q8BJQ2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Usp1Q8BJQ2 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Usp1Q8BJQ2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp1Q8BJQ2 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Usp1Q8BJQ2 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.28■□□□□ 0.2
Usp1Q8BJQ2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp1Q8BJQ2 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.28■□□□□ 0.2
Usp1Q8BJQ2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.28■□□□□ 0.2
Usp1Q8BJQ2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.28■□□□□ 0.2
Usp1Q8BJQ2 Gm45747-201ENSMUST00000212203 999 ntBASIC16.28■□□□□ 0.2
Usp1Q8BJQ2 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.28■□□□□ 0.2
Usp1Q8BJQ2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp1Q8BJQ2 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp1Q8BJQ2 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp1Q8BJQ2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp1Q8BJQ2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp1Q8BJQ2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp1Q8BJQ2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms