Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Pif1Q80SX8 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pif1Q80SX8 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.15□□□□□ -0.14
Pif1Q80SX8 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.15□□□□□ -0.14
Pif1Q80SX8 Gm45747-201ENSMUST00000212203 999 ntBASIC14.15□□□□□ -0.14
Pif1Q80SX8 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.15□□□□□ -0.14
Pif1Q80SX8 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.15□□□□□ -0.14
Pif1Q80SX8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pif1Q80SX8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Pif1Q80SX8 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pif1Q80SX8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pif1Q80SX8 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pif1Q80SX8 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pif1Q80SX8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pif1Q80SX8 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Pif1Q80SX8 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pif1Q80SX8 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Gm15427-201ENSMUST00000117288 531 ntBASIC14.14□□□□□ -0.15
Pif1Q80SX8 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Gm14057-201ENSMUST00000120631 482 ntBASIC14.14□□□□□ -0.15
Pif1Q80SX8 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.14□□□□□ -0.15
Pif1Q80SX8 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Gm5177-201ENSMUST00000183092 997 ntBASIC14.14□□□□□ -0.15
Pif1Q80SX8 Mir6956-201ENSMUST00000183598 62 ntBASIC14.14□□□□□ -0.15
Pif1Q80SX8 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pif1Q80SX8 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
Pif1Q80SX8 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.14□□□□□ -0.15
Pif1Q80SX8 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pif1Q80SX8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pif1Q80SX8 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.13□□□□□ -0.15
Pif1Q80SX8 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pif1Q80SX8 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.13□□□□□ -0.15
Pif1Q80SX8 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pif1Q80SX8 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pif1Q80SX8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pif1Q80SX8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pif1Q80SX8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
Pif1Q80SX8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.12□□□□□ -0.15
Pif1Q80SX8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pif1Q80SX8 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Pif1Q80SX8 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms