Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.92■□□□□ 0.3
Ecm1Q61508 Gm17837-201ENSMUST00000186435 985 ntBASIC16.92■□□□□ 0.3
Ecm1Q61508 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.92■□□□□ 0.3
Ecm1Q61508 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ecm1Q61508 Gm29541-201ENSMUST00000191351 678 ntBASIC16.92■□□□□ 0.3
Ecm1Q61508 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.92■□□□□ 0.3
Ecm1Q61508 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ecm1Q61508 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ecm1Q61508 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.92■□□□□ 0.3
Ecm1Q61508 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.92■□□□□ 0.3
Ecm1Q61508 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ecm1Q61508 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ecm1Q61508 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ecm1Q61508 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ecm1Q61508 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ecm1Q61508 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ecm1Q61508 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ecm1Q61508 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ecm1Q61508 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ecm1Q61508 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.92■□□□□ 0.3
Ecm1Q61508 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.92■□□□□ 0.3
Ecm1Q61508 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ecm1Q61508 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ecm1Q61508 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ecm1Q61508 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ecm1Q61508 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ecm1Q61508 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ecm1Q61508 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ecm1Q61508 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ecm1Q61508 Gm13015-201ENSMUST00000118674 204 ntBASIC16.91■□□□□ 0.3
Ecm1Q61508 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.91■□□□□ 0.3
Ecm1Q61508 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ecm1Q61508 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ecm1Q61508 Gm27920-201ENSMUST00000183953 96 ntBASIC16.91■□□□□ 0.3
Ecm1Q61508 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.91■□□□□ 0.3
Ecm1Q61508 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.91■□□□□ 0.3
Ecm1Q61508 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ecm1Q61508 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ecm1Q61508 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ecm1Q61508 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ecm1Q61508 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ecm1Q61508 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ecm1Q61508 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ecm1Q61508 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ecm1Q61508 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ecm1Q61508 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ecm1Q61508 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ecm1Q61508 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ecm1Q61508 Gm13453-201ENSMUST00000118708 357 ntBASIC16.9■□□□□ 0.3
Ecm1Q61508 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.9■□□□□ 0.3
Ecm1Q61508 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ecm1Q61508 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ecm1Q61508 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.9■□□□□ 0.3
Ecm1Q61508 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ecm1Q61508 Gm18049-201ENSMUST00000208909 581 ntBASIC16.9■□□□□ 0.3
Ecm1Q61508 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.9■□□□□ 0.3
Ecm1Q61508 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.9■□□□□ 0.3
Ecm1Q61508 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ecm1Q61508 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ecm1Q61508 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ecm1Q61508 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ecm1Q61508 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ecm1Q61508 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ecm1Q61508 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.9■□□□□ 0.3
Ecm1Q61508 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ecm1Q61508 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ecm1Q61508 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.9■□□□□ 0.3
Ecm1Q61508 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ecm1Q61508 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ecm1Q61508 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ecm1Q61508 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.89■□□□□ 0.29
Ecm1Q61508 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ecm1Q61508 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ecm1Q61508 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.89■□□□□ 0.29
Ecm1Q61508 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ecm1Q61508 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Ecm1Q61508 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ecm1Q61508 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Ecm1Q61508 Gm8410-201ENSMUST00000117225 605 ntBASIC16.89■□□□□ 0.29
Ecm1Q61508 Gm27989-201ENSMUST00000184721 107 ntBASIC16.89■□□□□ 0.29
Ecm1Q61508 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ecm1Q61508 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ecm1Q61508 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ecm1Q61508 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ecm1Q61508 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.89■□□□□ 0.29
Ecm1Q61508 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ecm1Q61508 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ecm1Q61508 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Ecm1Q61508 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Ecm1Q61508 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ecm1Q61508 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ecm1Q61508 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Ecm1Q61508 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ecm1Q61508 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Ecm1Q61508 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.88■□□□□ 0.29
Ecm1Q61508 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ecm1Q61508 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ecm1Q61508 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Ecm1Q61508 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ecm1Q61508 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms