Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox17Q61473 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Sox17Q61473 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox17Q61473 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox17Q61473 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox17Q61473 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox17Q61473 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox17Q61473 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox17Q61473 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.43□□□□□ -0.1
Sox17Q61473 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.43□□□□□ -0.1
Sox17Q61473 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox17Q61473 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.43□□□□□ -0.1
Sox17Q61473 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Sox17Q61473 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox17Q61473 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox17Q61473 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox17Q61473 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox17Q61473 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox17Q61473 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox17Q61473 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox17Q61473 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox17Q61473 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox17Q61473 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox17Q61473 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox17Q61473 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Sox17Q61473 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox17Q61473 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox17Q61473 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox17Q61473 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox17Q61473 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox17Q61473 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox17Q61473 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox17Q61473 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox17Q61473 Grk6-207ENSMUST00000225925 2769 ntBASIC14.42□□□□□ -0.1
Sox17Q61473 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sox17Q61473 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox17Q61473 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Sox17Q61473 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox17Q61473 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.42□□□□□ -0.1
Sox17Q61473 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.42□□□□□ -0.1
Sox17Q61473 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.42□□□□□ -0.1
Sox17Q61473 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.42□□□□□ -0.1
Sox17Q61473 Mir5130-201ENSMUST00000175160 84 ntBASIC14.42□□□□□ -0.1
Sox17Q61473 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox17Q61473 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.42□□□□□ -0.1
Sox17Q61473 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox17Q61473 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox17Q61473 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox17Q61473 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox17Q61473 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Sox17Q61473 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.42□□□□□ -0.1
Sox17Q61473 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox17Q61473 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox17Q61473 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox17Q61473 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox17Q61473 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox17Q61473 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox17Q61473 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.41□□□□□ -0.1
Sox17Q61473 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.41□□□□□ -0.1
Sox17Q61473 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox17Q61473 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox17Q61473 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox17Q61473 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox17Q61473 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox17Q61473 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.41□□□□□ -0.1
Sox17Q61473 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox17Q61473 Gm12134-201ENSMUST00000122109 520 ntBASIC14.41□□□□□ -0.1
Sox17Q61473 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.41□□□□□ -0.1
Sox17Q61473 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox17Q61473 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox17Q61473 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.41□□□□□ -0.1
Sox17Q61473 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox17Q61473 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox17Q61473 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox17Q61473 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox17Q61473 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sox17Q61473 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox17Q61473 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox17Q61473 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Sox17Q61473 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox17Q61473 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox17Q61473 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Sox17Q61473 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox17Q61473 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Sox17Q61473 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.4□□□□□ -0.1
Sox17Q61473 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.4□□□□□ -0.1
Sox17Q61473 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox17Q61473 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Sox17Q61473 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.4□□□□□ -0.1
Sox17Q61473 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.4□□□□□ -0.1
Sox17Q61473 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Sox17Q61473 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.4□□□□□ -0.1
Sox17Q61473 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.4□□□□□ -0.1
Sox17Q61473 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox17Q61473 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox17Q61473 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox17Q61473 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox17Q61473 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.4□□□□□ -0.1
Sox17Q61473 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox17Q61473 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms