Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp3P63024 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp3P63024 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp3P63024 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp3P63024 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Vamp3P63024 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Vamp3P63024 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Vamp3P63024 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp3P63024 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp3P63024 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp3P63024 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.79□□□□□ -0.52
Vamp3P63024 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp3P63024 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp3P63024 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp3P63024 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp3P63024 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Vamp3P63024 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp3P63024 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp3P63024 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp3P63024 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp3P63024 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp3P63024 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp3P63024 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp3P63024 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp3P63024 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp3P63024 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp3P63024 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Vamp3P63024 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp3P63024 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Vamp3P63024 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp3P63024 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Vamp3P63024 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Vamp3P63024 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.78□□□□□ -0.52
Vamp3P63024 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.78□□□□□ -0.52
Vamp3P63024 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp3P63024 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC11.78□□□□□ -0.52
Vamp3P63024 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp3P63024 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.78□□□□□ -0.52
Vamp3P63024 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp3P63024 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp3P63024 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp3P63024 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp3P63024 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.78□□□□□ -0.52
Vamp3P63024 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp3P63024 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Vamp3P63024 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp3P63024 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Vamp3P63024 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vamp3P63024 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Vamp3P63024 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Vamp3P63024 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Vamp3P63024 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Vamp3P63024 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vamp3P63024 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Vamp3P63024 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vamp3P63024 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vamp3P63024 Matn2-206ENSMUST00000228570 2798 ntBASIC11.77□□□□□ -0.53
Vamp3P63024 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Vamp3P63024 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Vamp3P63024 Gm14281-201ENSMUST00000121700 1294 ntBASIC11.77□□□□□ -0.53
Vamp3P63024 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Vamp3P63024 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vamp3P63024 Gm29241-201ENSMUST00000189260 1096 ntBASIC11.77□□□□□ -0.53
Vamp3P63024 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC11.77□□□□□ -0.53
Vamp3P63024 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vamp3P63024 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.77□□□□□ -0.53
Vamp3P63024 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.77□□□□□ -0.53
Vamp3P63024 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vamp3P63024 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vamp3P63024 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vamp3P63024 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vamp3P63024 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vamp3P63024 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vamp3P63024 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC11.77□□□□□ -0.53
Vamp3P63024 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vamp3P63024 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vamp3P63024 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vamp3P63024 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vamp3P63024 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vamp3P63024 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vamp3P63024 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vamp3P63024 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vamp3P63024 Gm7712-202ENSMUST00000222331 1510 ntBASIC11.76□□□□□ -0.53
Vamp3P63024 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vamp3P63024 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vamp3P63024 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vamp3P63024 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.76□□□□□ -0.53
Vamp3P63024 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vamp3P63024 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vamp3P63024 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Vamp3P63024 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vamp3P63024 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vamp3P63024 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.76□□□□□ -0.53
Vamp3P63024 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Vamp3P63024 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vamp3P63024 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vamp3P63024 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vamp3P63024 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vamp3P63024 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Vamp3P63024 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms