Protein–RNA interactions for Protein: P01736

T-cell receptor beta chain V region PHDS203 (Fragment), mousemouse

Predictions only

Length 120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01736 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01736 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01736 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01736 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
P01736 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P01736 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.45□□□□□ -0.58
P01736 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01736 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01736 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01736 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01736 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.45□□□□□ -0.58
P01736 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01736 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01736 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01736 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01736 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01736 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01736 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01736 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01736 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01736 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01736 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
P01736 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
P01736 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
P01736 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01736 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01736 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC11.44□□□□□ -0.58
P01736 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC11.44□□□□□ -0.58
P01736 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
P01736 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
P01736 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC11.44□□□□□ -0.58
P01736 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
P01736 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
P01736 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01736 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.44□□□□□ -0.58
P01736 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01736 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01736 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01736 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01736 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
P01736 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01736 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01736 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01736 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC11.44□□□□□ -0.58
P01736 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01736 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01736 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
P01736 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.43□□□□□ -0.58
P01736 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC11.43□□□□□ -0.58
P01736 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
P01736 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
P01736 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
P01736 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC11.43□□□□□ -0.58
P01736 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Gm44450-201ENSMUST00000199528 114 ntBASIC11.43□□□□□ -0.58
P01736 Gm16042-201ENSMUST00000204813 1247 ntBASIC11.43□□□□□ -0.58
P01736 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC11.43□□□□□ -0.58
P01736 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC11.43□□□□□ -0.58
P01736 AC135637.1-201ENSMUST00000227750 365 ntBASIC11.43□□□□□ -0.58
P01736 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.43□□□□□ -0.58
P01736 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
P01736 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.43□□□□□ -0.58
P01736 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P01736 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
P01736 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01736 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01736 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01736 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P01736 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01736 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01736 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms