Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.88■□□□□ 0.29
Prom1O54990 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.88■□□□□ 0.29
Prom1O54990 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.88■□□□□ 0.29
Prom1O54990 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.88■□□□□ 0.29
Prom1O54990 Gm27622-201ENSMUST00000183779 60 ntBASIC16.88■□□□□ 0.29
Prom1O54990 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Prom1O54990 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.88■□□□□ 0.29
Prom1O54990 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.88■□□□□ 0.29
Prom1O54990 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prom1O54990 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
Prom1O54990 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prom1O54990 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.88■□□□□ 0.29
Prom1O54990 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prom1O54990 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prom1O54990 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.88■□□□□ 0.29
Prom1O54990 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.88■□□□□ 0.29
Prom1O54990 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prom1O54990 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prom1O54990 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prom1O54990 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prom1O54990 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prom1O54990 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Prom1O54990 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prom1O54990 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Prom1O54990 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Prom1O54990 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prom1O54990 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prom1O54990 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Prom1O54990 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prom1O54990 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Prom1O54990 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Prom1O54990 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prom1O54990 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Prom1O54990 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Prom1O54990 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Prom1O54990 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.87■□□□□ 0.29
Prom1O54990 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Prom1O54990 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Prom1O54990 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Prom1O54990 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.87■□□□□ 0.29
Prom1O54990 Gm10253-201ENSMUST00000194270 940 ntBASIC16.87■□□□□ 0.29
Prom1O54990 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Prom1O54990 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.87■□□□□ 0.29
Prom1O54990 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.87■□□□□ 0.29
Prom1O54990 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prom1O54990 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prom1O54990 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prom1O54990 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prom1O54990 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prom1O54990 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prom1O54990 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prom1O54990 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prom1O54990 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Prom1O54990 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.86■□□□□ 0.29
Prom1O54990 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.86■□□□□ 0.29
Prom1O54990 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Prom1O54990 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prom1O54990 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Prom1O54990 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Prom1O54990 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prom1O54990 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.86■□□□□ 0.29
Prom1O54990 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prom1O54990 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.86■□□□□ 0.29
Prom1O54990 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.86■□□□□ 0.29
Prom1O54990 Gm15483-201ENSMUST00000120338 456 ntBASIC16.86■□□□□ 0.29
Prom1O54990 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.86■□□□□ 0.29
Prom1O54990 Gm24158-201ENSMUST00000175263 71 ntBASIC16.86■□□□□ 0.29
Prom1O54990 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Prom1O54990 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Prom1O54990 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Prom1O54990 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.86■□□□□ 0.29
Prom1O54990 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.86■□□□□ 0.29
Prom1O54990 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prom1O54990 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prom1O54990 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prom1O54990 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prom1O54990 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prom1O54990 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prom1O54990 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prom1O54990 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.86■□□□□ 0.29
Prom1O54990 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prom1O54990 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prom1O54990 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prom1O54990 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prom1O54990 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prom1O54990 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prom1O54990 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prom1O54990 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prom1O54990 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.85■□□□□ 0.29
Prom1O54990 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prom1O54990 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prom1O54990 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prom1O54990 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prom1O54990 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prom1O54990 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prom1O54990 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prom1O54990 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prom1O54990 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prom1O54990 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prom1O54990 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms