Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc1a6O35544 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Slc1a6O35544 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.14■□□□□ 0.01
Slc1a6O35544 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc1a6O35544 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc1a6O35544 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.14■□□□□ 0.01
Slc1a6O35544 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc1a6O35544 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Slc1a6O35544 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Slc1a6O35544 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc1a6O35544 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc1a6O35544 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Slc1a6O35544 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Slc1a6O35544 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Slc1a6O35544 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc1a6O35544 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Slc1a6O35544 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc1a6O35544 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Slc1a6O35544 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.13■□□□□ 0.01
Slc1a6O35544 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc1a6O35544 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Slc1a6O35544 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Slc1a6O35544 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.13■□□□□ 0.01
Slc1a6O35544 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.13■□□□□ 0.01
Slc1a6O35544 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.13■□□□□ 0.01
Slc1a6O35544 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.13■□□□□ 0.01
Slc1a6O35544 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.13■□□□□ 0.01
Slc1a6O35544 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Slc1a6O35544 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.13■□□□□ 0.01
Slc1a6O35544 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.13■□□□□ 0.01
Slc1a6O35544 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.13■□□□□ 0.01
Slc1a6O35544 Gm6623-201ENSMUST00000173570 544 ntBASIC15.13■□□□□ 0.01
Slc1a6O35544 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.13■□□□□ 0.01
Slc1a6O35544 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.13■□□□□ 0.01
Slc1a6O35544 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.13■□□□□ 0.01
Slc1a6O35544 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.13■□□□□ 0.01
Slc1a6O35544 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.13■□□□□ 0.01
Slc1a6O35544 Gm8825-201ENSMUST00000182565 998 ntBASIC15.13■□□□□ 0.01
Slc1a6O35544 Gm4518-201ENSMUST00000182638 718 ntBASIC15.13■□□□□ 0.01
Slc1a6O35544 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.13■□□□□ 0.01
Slc1a6O35544 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.13■□□□□ 0.01
Slc1a6O35544 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.13■□□□□ 0.01
Slc1a6O35544 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.13■□□□□ 0.01
Slc1a6O35544 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc1a6O35544 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Slc1a6O35544 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.13■□□□□ 0.01
Slc1a6O35544 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc1a6O35544 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.13■□□□□ 0.01
Slc1a6O35544 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc1a6O35544 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc1a6O35544 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc1a6O35544 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc1a6O35544 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc1a6O35544 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc1a6O35544 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.13■□□□□ 0.01
Slc1a6O35544 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc1a6O35544 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Slc1a6O35544 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Slc1a6O35544 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slc1a6O35544 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc1a6O35544 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Slc1a6O35544 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc1a6O35544 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Slc1a6O35544 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slc1a6O35544 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc1a6O35544 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc1a6O35544 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slc1a6O35544 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slc1a6O35544 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.12■□□□□ 0.01
Slc1a6O35544 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.12■□□□□ 0.01
Slc1a6O35544 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.12■□□□□ 0.01
Slc1a6O35544 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.12■□□□□ 0.01
Slc1a6O35544 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slc1a6O35544 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slc1a6O35544 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc1a6O35544 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc1a6O35544 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc1a6O35544 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Slc1a6O35544 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc1a6O35544 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc1a6O35544 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Slc1a6O35544 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc1a6O35544 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc1a6O35544 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.12■□□□□ 0.01
Slc1a6O35544 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc1a6O35544 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc1a6O35544 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc1a6O35544 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Slc1a6O35544 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc1a6O35544 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc1a6O35544 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Slc1a6O35544 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc1a6O35544 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slc1a6O35544 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc1a6O35544 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc1a6O35544 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc1a6O35544 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slc1a6O35544 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.11■□□□□ 0.01
Slc1a6O35544 Gm13312-201ENSMUST00000119631 718 ntBASIC15.11■□□□□ 0.01
Slc1a6O35544 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms