Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC21.77■■□□□ 1.08
FOXN1O15353 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXN1O15353 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXN1O15353 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.77■■□□□ 1.08
FOXN1O15353 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXN1O15353 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXN1O15353 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
FOXN1O15353 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.77■■□□□ 1.08
FOXN1O15353 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.07
FOXN1O15353 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FOXN1O15353 AC104417.2-201ENST00000562989 1793 ntBASIC21.76■■□□□ 1.07
FOXN1O15353 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FOXN1O15353 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.76■■□□□ 1.07
FOXN1O15353 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FOXN1O15353 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
FOXN1O15353 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
FOXN1O15353 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
FOXN1O15353 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FOXN1O15353 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FOXN1O15353 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FOXN1O15353 RPS2P28-201ENST00000314255 741 ntBASIC21.76■■□□□ 1.07
FOXN1O15353 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FOXN1O15353 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
FOXN1O15353 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.76■■□□□ 1.07
FOXN1O15353 POM121L3P-201ENST00000419331 1163 ntBASIC21.76■■□□□ 1.07
FOXN1O15353 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FOXN1O15353 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.76■■□□□ 1.07
FOXN1O15353 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
FOXN1O15353 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.76■■□□□ 1.07
FOXN1O15353 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.76■■□□□ 1.07
FOXN1O15353 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
FOXN1O15353 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
FOXN1O15353 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
FOXN1O15353 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FOXN1O15353 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
FOXN1O15353 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FOXN1O15353 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.75■■□□□ 1.07
FOXN1O15353 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
FOXN1O15353 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
FOXN1O15353 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.75■■□□□ 1.07
FOXN1O15353 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FOXN1O15353 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FOXN1O15353 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
FOXN1O15353 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
FOXN1O15353 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC21.75■■□□□ 1.07
FOXN1O15353 AL645939.2-201ENST00000427340 991 ntBASIC21.75■■□□□ 1.07
FOXN1O15353 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.75■■□□□ 1.07
FOXN1O15353 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC21.75■■□□□ 1.07
FOXN1O15353 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.75■■□□□ 1.07
FOXN1O15353 MIR5100-201ENST00000579544 119 ntBASIC21.75■■□□□ 1.07
FOXN1O15353 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FOXN1O15353 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
FOXN1O15353 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
FOXN1O15353 AC141586.3-201ENST00000562166 1838 ntBASIC21.75■■□□□ 1.07
FOXN1O15353 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.75■■□□□ 1.07
FOXN1O15353 GPAT2P1-201ENST00000444924 1672 ntBASIC21.75■■□□□ 1.07
FOXN1O15353 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FOXN1O15353 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
FOXN1O15353 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FOXN1O15353 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.74■■□□□ 1.07
FOXN1O15353 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FOXN1O15353 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
FOXN1O15353 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FOXN1O15353 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
FOXN1O15353 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.74■■□□□ 1.07
FOXN1O15353 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FOXN1O15353 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FOXN1O15353 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
FOXN1O15353 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.74■■□□□ 1.07
FOXN1O15353 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
FOXN1O15353 RN7SL606P-201ENST00000472779 293 ntBASIC21.74■■□□□ 1.07
FOXN1O15353 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
FOXN1O15353 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC21.74■■□□□ 1.07
FOXN1O15353 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.74■■□□□ 1.07
FOXN1O15353 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC21.74■■□□□ 1.07
FOXN1O15353 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
FOXN1O15353 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FOXN1O15353 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FOXN1O15353 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
FOXN1O15353 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
FOXN1O15353 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FOXN1O15353 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FOXN1O15353 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FOXN1O15353 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.73■■□□□ 1.07
FOXN1O15353 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
FOXN1O15353 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
FOXN1O15353 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC21.73■■□□□ 1.07
FOXN1O15353 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FOXN1O15353 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FOXN1O15353 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
FOXN1O15353 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.73■■□□□ 1.07
FOXN1O15353 AC132008.2-207ENST00000454517 770 ntBASIC21.73■■□□□ 1.07
FOXN1O15353 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC21.73■■□□□ 1.07
FOXN1O15353 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FOXN1O15353 SPCS2P1-201ENST00000561636 679 ntBASIC21.73■■□□□ 1.07
FOXN1O15353 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.73■■□□□ 1.07
FOXN1O15353 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC21.73■■□□□ 1.07
FOXN1O15353 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC21.73■■□□□ 1.07
FOXN1O15353 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FOXN1O15353 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms