Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shisa8J3QNX5 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shisa8J3QNX5 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Shisa8J3QNX5 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shisa8J3QNX5 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Shisa8J3QNX5 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.02□□□□□ -0.16
Shisa8J3QNX5 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shisa8J3QNX5 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shisa8J3QNX5 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Shisa8J3QNX5 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shisa8J3QNX5 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa8J3QNX5 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.02□□□□□ -0.17
Shisa8J3QNX5 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.02□□□□□ -0.17
Shisa8J3QNX5 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa8J3QNX5 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Shisa8J3QNX5 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa8J3QNX5 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa8J3QNX5 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa8J3QNX5 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa8J3QNX5 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa8J3QNX5 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa8J3QNX5 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Shisa8J3QNX5 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa8J3QNX5 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Grk6-207ENSMUST00000225925 2769 ntBASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Gm27389-201ENSMUST00000183622 195 ntBASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa8J3QNX5 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa8J3QNX5 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14□□□□□ -0.17
Shisa8J3QNX5 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa8J3QNX5 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa8J3QNX5 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14□□□□□ -0.17
Shisa8J3QNX5 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa8J3QNX5 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa8J3QNX5 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa8J3QNX5 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa8J3QNX5 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa8J3QNX5 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14□□□□□ -0.17
Shisa8J3QNX5 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa8J3QNX5 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa8J3QNX5 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14□□□□□ -0.17
Shisa8J3QNX5 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Shisa8J3QNX5 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14□□□□□ -0.17
Shisa8J3QNX5 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14□□□□□ -0.17
Shisa8J3QNX5 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14□□□□□ -0.17
Shisa8J3QNX5 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Shisa8J3QNX5 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14□□□□□ -0.17
Shisa8J3QNX5 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa8J3QNX5 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Shisa8J3QNX5 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Shisa8J3QNX5 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14□□□□□ -0.17
Shisa8J3QNX5 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa8J3QNX5 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa8J3QNX5 Gm43509-201ENSMUST00000196551 2594 ntBASIC14□□□□□ -0.17
Shisa8J3QNX5 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa8J3QNX5 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14□□□□□ -0.17
Shisa8J3QNX5 Gm13337-201ENSMUST00000119183 1594 ntBASIC14□□□□□ -0.17
Shisa8J3QNX5 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14□□□□□ -0.17
Shisa8J3QNX5 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Shisa8J3QNX5 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms