Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3854A0A1B0GSS6 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3854A0A1B0GSS6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Gm3854A0A1B0GSS6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3854A0A1B0GSS6 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3854A0A1B0GSS6 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.32■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm24158-201ENSMUST00000175263 71 ntBASIC15.32■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm27430-201ENSMUST00000184585 107 ntBASIC15.32■□□□□ 0.04
Gm3854A0A1B0GSS6 Mir7023-201ENSMUST00000185093 64 ntBASIC15.32■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm44333-201ENSMUST00000197168 107 ntBASIC15.32■□□□□ 0.04
Gm3854A0A1B0GSS6 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3854A0A1B0GSS6 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Gm3854A0A1B0GSS6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3854A0A1B0GSS6 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3854A0A1B0GSS6 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Gm3854A0A1B0GSS6 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3854A0A1B0GSS6 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm3854A0A1B0GSS6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3854A0A1B0GSS6 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm10253-201ENSMUST00000194270 940 ntBASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3854A0A1B0GSS6 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms