Protein–RNA interactions for Protein: A0A140T8M0

Igkv1-117, Immunoglobulin kappa variable 1-117 (Fragment), mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-117A0A140T8M0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv1-117A0A140T8M0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv1-117A0A140T8M0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Igkv1-117A0A140T8M0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv1-117A0A140T8M0 Gm13181-201ENSMUST00000120117 1069 ntBASIC10.18□□□□□ -0.78
Igkv1-117A0A140T8M0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv1-117A0A140T8M0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv1-117A0A140T8M0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv1-117A0A140T8M0 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv1-117A0A140T8M0 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv1-117A0A140T8M0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv1-117A0A140T8M0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Igkv1-117A0A140T8M0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Igkv1-117A0A140T8M0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv1-117A0A140T8M0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv1-117A0A140T8M0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv1-117A0A140T8M0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv1-117A0A140T8M0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv1-117A0A140T8M0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv1-117A0A140T8M0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv1-117A0A140T8M0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Gm43399-201ENSMUST00000202546 2374 ntBASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Gm29707-201ENSMUST00000196325 491 ntBASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Fbxl12-205ENSMUST00000140702 1555 ntBASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv1-117A0A140T8M0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Gm11539-201ENSMUST00000119837 557 ntBASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv1-117A0A140T8M0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms