Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Gm25406-201ENSMUST00000157599 105 ntBASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Gm13312-201ENSMUST00000119631 718 ntBASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Olfr129-201ENSMUST00000122318 993 ntBASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-1A0A075B699 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Prkcz2-201ENSMUST00000206136 1756 ntBASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-1A0A075B699 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms