Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8n-2A0A075B633 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Trav8n-2A0A075B633 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.04□□□□□ -0.16
Trav8n-2A0A075B633 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8n-2A0A075B633 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8n-2A0A075B633 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8n-2A0A075B633 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav8n-2A0A075B633 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav8n-2A0A075B633 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav8n-2A0A075B633 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav8n-2A0A075B633 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Trav8n-2A0A075B633 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav8n-2A0A075B633 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav8n-2A0A075B633 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav8n-2A0A075B633 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav8n-2A0A075B633 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav8n-2A0A075B633 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav8n-2A0A075B633 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav8n-2A0A075B633 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav8n-2A0A075B633 Gm6973-201ENSMUST00000117080 721 ntBASIC14.02□□□□□ -0.17
Trav8n-2A0A075B633 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav8n-2A0A075B633 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav8n-2A0A075B633 Gm5779-201ENSMUST00000218467 910 ntBASIC14.02□□□□□ -0.17
Trav8n-2A0A075B633 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.02□□□□□ -0.17
Trav8n-2A0A075B633 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.02□□□□□ -0.17
Trav8n-2A0A075B633 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav8n-2A0A075B633 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav8n-2A0A075B633 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav8n-2A0A075B633 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav8n-2A0A075B633 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.02□□□□□ -0.17
Trav8n-2A0A075B633 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trav8n-2A0A075B633 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav8n-2A0A075B633 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav8n-2A0A075B633 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav8n-2A0A075B633 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav8n-2A0A075B633 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav8n-2A0A075B633 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8n-2A0A075B633 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8n-2A0A075B633 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8n-2A0A075B633 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8n-2A0A075B633 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8n-2A0A075B633 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Trav8n-2A0A075B633 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8n-2A0A075B633 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.01□□□□□ -0.17
Trav8n-2A0A075B633 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav8n-2A0A075B633 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav8n-2A0A075B633 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8n-2A0A075B633 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8n-2A0A075B633 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8n-2A0A075B633 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8n-2A0A075B633 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trav8n-2A0A075B633 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8n-2A0A075B633 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav8n-2A0A075B633 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8n-2A0A075B633 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8n-2A0A075B633 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8n-2A0A075B633 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8n-2A0A075B633 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8n-2A0A075B633 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8n-2A0A075B633 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8n-2A0A075B633 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8n-2A0A075B633 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8n-2A0A075B633 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8n-2A0A075B633 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8n-2A0A075B633 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8n-2A0A075B633 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8n-2A0A075B633 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8n-2A0A075B633 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8n-2A0A075B633 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms